Cis Element:Phage lambda attP: Difference between revisions

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Table edited by Bmcintosh via TableEdit
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NC_001416: 27718..27746<br />{{GBrowseFigureByCoord|27713|27751|bacteriophage_lambda|NC_001416}}  
NC_001416: 27571..27813<br />{{GBrowseFigureByCoord|27521|27863|bacteriophage_lambda|NC_001416}}  
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{{GBrowseLink|bacteriophage_lambda|NC_001416|27718|27746|Gbrowse (Bacteriophage lambda)}}
{{GBrowseLink|bacteriophage_lambda|NC_001416|27571|27813|Gbrowse (Bacteriophage lambda)}}
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{{GBrowseFastaLink|bacteriophage_lambda|NC_001416|27718|27746|FASTA Dump}}  
{{GBrowseFastaLink|bacteriophage_lambda|NC_001416|27571|27813|FASTA Dump}}  


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Revision as of 21:13, 23 June 2009

Cis element summary table

Standard Name

lambda attP

Synonyms
Function

phage attachment site

Location

approximately nt 27 571 - 27 813 (PMID:6246439[1])

attP core sequence located at nt 27 721 - 27 735 (PMID:6246439[1])

SO terms


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Notes

In the free phage, the att site is referred to as attP (phage attachment site) while the corresponding site in a host genome is called attB (bacterial attachment site). After integration occurs to create a prophage, these sites are then known as attL (left end of prophage) and attR (right end of prophage). Reviewed in Lambda II.[2]

Location and Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

Phage Lambda (NC_001416)

NC_001416: 27571..27813
gbrowse_img.php?coord=27521..27863&genome=bacteriophage_lambda&name=NC_001416&trackset=0&width=300&.png

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Notes

Interactions

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Hsu, PL et al. (1980) The lambda phage att site: functional limits and interaction with Int protein. Nature 285 85-91 PubMed
  2. ↑ Lambda II Monograph 13. Edited by ROGER W. HENDRIX, JEFFREY W. ROBERTS,FRANKLIN W. STAHL and ROBERT A. WEISBERG. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724. 1983

Categories

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