Cis Element:Phage lambda ori: Difference between revisions

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Table edited by Bmcintosh via TableEdit
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===Notes===
===Notes===
* The lambda ''ori'' has 4 repeated segments located at the following coordinates<ref name='PMID:6455332'/>:
* The lambda ''ori'' has 4 repeated segments located at the following coordinates<ref name='PMID:6455332'/>:
#* ori1 - nt 39865 - 39882
#* ori1 - nt 39034 - 39051
#* ori2 - nt 39885 - 39902
#* ori2 - nt 39054 - 39071
#* ori3 - nt 39909 - 39926
#* ori3 - nt 39078 - 39095
#* ori4 - nt 39932 - 39949
#* ori4 - nt 39101 - 39118


== Interactions==
== Interactions==

Revision as of 21:28, 22 June 2009

Cis element summary table

Standard Name

Lambda ori

Synonyms
Function

Initiation control site for replication of the lambda genome

Location

within O gene

SO terms


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Notes

Location and Sequence

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Strain Map location Genome coordinates Genome browsers Sequence links

Phage Lambda (NC_001416)

NC_001416: 39034..39137
gbrowse_img.php?coord=39024..39147&genome=bacteriophage_lambda&name=NC_001416&trackset=0&width=300&.png

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Notes

  • The lambda ori has 4 repeated segments located at the following coordinates[1]:
    • ori1 - nt 39034 - 39051
    • ori2 - nt 39054 - 39071
    • ori3 - nt 39078 - 39095
    • ori4 - nt 39101 - 39118

Interactions

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Partner Type Partner Notes References Evidence

Protein

Phage lambda O protein

Protein

Phage lambda P protein


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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference
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Notes

Accessions

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Database Accession Notes
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Notes

References

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  1. ↑ Moore, DD et al. () Sequence organization of the origins of DNA replication in lambdoid coliphages. Gene 14 91-101 PubMed

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