pcm:Gene Product(s): Difference between revisions

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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0005737  
[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
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cytoplasm  
cytoplasm  
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required fields missing   
required fields missing   
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GO:0006464  
[[Category:GO:0006464_!_protein_modification_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006464_!_protein_modification_process GO:0006464]
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protein modification process  
protein modification process  
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required fields missing   
required fields missing   
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GO:0030091  
[[Category:GO:0030091_!_protein_repair]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0030091_!_protein_repair GO:0030091]
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protein repair  
protein repair  
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required fields missing   
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[[Category:GO:0004719_!_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004719_!_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity GO:0004719]
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protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000020 GO_REF:0000020]<br />
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IEA: Inferred from Electronic Annotation
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HAMAP:MF_00090
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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Revision as of 04:02, 30 September 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

Pcm product

Synonyms

L-isoaspartate protein carboxylmethyltransferase type II product[1], B2743 product[2][1], Pcm product[2][1]

Product description

L-isoaspartate protein carboxylmethyltransferase type II[2][3]

EC number (for enzymes)
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See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0006464

protein modification process

P

Seeded from Riley et al 2006 [1].

required fields missing

GO:0030091

protein repair

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0004719

protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00090

F

Seeded from EcoCyc 12.5 [4]


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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes

cytoplasm

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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MVSRRVQALL DQLRAQGIQD EQVLNALAAV PREKFVDEAF EQKAWDNIAL PIGQGQTISQ
PYMVARMTEL LELTPQSRVL EIGTGSGYQT AILAHLVQHV CSVERIKGLQ WQARRRLKNL
DLHNVSTRHG DGWQGWQARA PFDAIIVTAA PPEIPTALMT QLDEGGILVL PVGEEHQYLK
RVRRRGGEFI IDTVEAVRFV PLVKGELA
Mol. Wt

23.26 kDa (calc) [2]

pI
Extinction coefficient

26470 - 26595 (calc based on 3 Y, 4 W, and 1 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10689-MONOMER

SwissModel (EcoliWiki Page)

SwissModel:P0A7A5

UniProt (EcoliWiki Page)

UniProt:P0A7A5

PFAM (EcoliWiki Page)

PFAM:PF01135

RefSeq (EcoliWiki Page)

RefSeq:NP_417223

ModBase (EcoliWiki Page)

ModBase:P0A7A5

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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