ade:Gene Product(s): Difference between revisions
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==Nomenclature== | ==Nomenclature== | ||
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** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.5.4.2 3.5.4.2]<ref name='LIB:Riley_2006'/> | ** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.5.4.2 3.5.4.2]<ref name='LIB:Riley_2006'/> | ||
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<big>'''Gene Ontology'''</big> | <big>'''Gene Ontology'''</big> | ||
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<span id="Interactions"></span><big>'''Interactions'''</big> | <span id="Interactions"></span><big>'''Interactions'''</big> | ||
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could be indirect | could be indirect | ||
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==Localization== | ==Localization== | ||
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!Compartment!!Description!!Evidence!!Notes | !Compartment!!Description!!Evidence!!Notes | ||
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<span id="Sequence"></span><big>'''Physical Properties'''</big> | <span id="Sequence"></span><big>'''Physical Properties'''</big> | ||
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41370 - 42745 (calc based on 13 Y, 4 W, and 11 C residues) | 41370 - 42745 (calc based on 13 Y, 4 W, and 11 C residues) | ||
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<big>'''Domains/Motifs/Modification Sites'''</big> | <big>'''Domains/Motifs/Modification Sites'''</big> | ||
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!Type!!Residues!!Description!!Notes | !Type!!Residues!!Description!!Notes | ||
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<span id="Structure"></span><big>'''Structure'''</big> | <span id="Structure"></span><big>'''Structure'''</big> | ||
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes | !Structure Type!!Organism!!Accession!!Residues covered!!Notes | ||
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!Resource type!!Source!!Notes/Reference | !Resource type!!Source!!Notes/Reference | ||
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__NOTOC__ | __NOTOC__ | ||
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===Categories=== | |||
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[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0008152_!_metabolic process]][[Category:Complex:cryptic adenine deaminase]] | |||
Revision as of 10:15, 3 August 2007
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
Ade product |
|---|---|
| Synonyms |
cryptic adenine deaminase product[1], B3665 product[2][1], Adu product[2][1], Ade product[2][1], YicP product[2][1] |
| Product description |
cryptic adenine deaminase monomer[2][3]; Component of ; cryptic adenine deaminase[3] |
| EC number (for enzymes) | |
| edit table | |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005737 |
cytoplasm |
C |
Seeded from Riley et al 2006 [1]. |
required fields missing | ||||
| GO:0008152 |
metabolic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| edit table |
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Interactions
| Partner Type | Partner | Notes |
|---|---|---|
|
Protein |
Subunits of cryptic adenine deaminase |
could be indirect |
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MNNSINHKFH HISRAEYQEL LAVSRGDAVA DYIIDNVSIL DLINGGEISG PIVIKGRYIA GVGAEYTDAP ALQRIDARGA TAVPGFIDAH LHIESSMMTP VTFETATLPR GLTTVICDPH EIVNVMGEAG FAWFARCAEQ ARQNQYLQVS SCVPALEGCD VNGASFTLEQ MLAWRDHPQV TGLAEMMDYP GVISGQNALL DKLDAFRHLT LDGHCPGLGG KELNAYITAG IENCHESYQL EEGRRKLQLG MSLMIREGSA ARNLNALAPL INEFNSPQCM LCTDDRNPWE IAHEGHIDAL IRRLIEQHNV PLHVAYRVAS WSTARHFGLN HLGLLAPGKQ ADIVLLSDAR KVTVQQVLVK GEPIDAQTLQ AEESARLAQS APPYGNTIAR QPVSASDFAL QFTPGKRYRV IDVIHNELIT HSHSSVYSEN GFDRDDVSFI AVLERYGQRL APACGLLGGF GLNEGALAAT VSHDSHNIVV IGRSAEEMAL AVNQVIQDGG GLCVVRNGQV QSHLPLPIAG LMSTDTAQSL AEQIDALKAA ARECGPLPDE PFIQMAFLSL PVIPALKLTS QGLFDGEKFA FTTLEVTE |
|---|---|
| Mol. Wt |
63.74 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
41370 - 42745 (calc based on 13 Y, 4 W, and 11 C residues) |
| edit table | |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
| Structure Type | Organism | Accession | Residues covered | Notes |
|---|---|---|---|---|
| edit table |
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Categories