bamC:Expression: Difference between revisions

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!|Molecule!!Organism or Strain!!Molecules per cell!!Growth conditions!!Growth rate!!Assay used!!Notes!!Reference(s)
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)
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Protein
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''E. coli'' K-12 MC4100
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8.68E+02
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molecules/cell
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combined data from rich and minimal media
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37
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emPAI
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PMID:18304323
 
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Revision as of 18:00, 23 June 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)
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Notes

Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

8.68E+02

molecules/cell

combined data from rich and minimal media

37

emPAI

PMID:18304323[1]

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Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

nlpB

dapA-nlpB

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Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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gbrowse_img.php?coord=2596867..2596907&genome=ecoli&name=MG1655&trackset=Gene+DNA_+Protein+flip&width=400&figure=Nterm&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b2477 (EcoliWiki Page)

NCBI GEO profiles for nlpB

microarray

GenExpDB:b2477 (EcoliWiki Page)

Summary of data for nlpB from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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<protect>

Notes

Accessions Related to bamC Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10658

EchoBASE (EcoliWiki Page)

EchoBASE:EB0652

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2477

EcoGene (EcoliWiki Page)

EcoGene:EG10658


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed

Categories

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