tolC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''tolC'' | ''tolC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc''<ref name='LIB:Riley_2006'/> | ''ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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TolC outer membrane channel<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | TolC outer membrane channel<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Outer membrane factor (OMF) of tripartite efflux pumps; channel-tunnel spanning the outer membrane and periplasm; homotrimeric; ColE1 tolerance<ref name='LIB:EcoGene'/> | Outer membrane factor (OMF) of tripartite efflux pumps; channel-tunnel spanning the outer membrane and periplasm; homotrimeric; ColE1 tolerance<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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transport channel<ref name='LIB:Riley_2006'/>, B3035<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WeeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Toc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RefI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MtcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | transport channel<ref name='LIB:Riley_2006'/>, B3035<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WeeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Toc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RefI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MtcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0042930 enterobactin transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0014070 response to organic cyclic substance ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Cellular Component''' | |||
* GO:0009279 cell outer membrane ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:tolC|tolC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:tolC|tolC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=tolC&loc=MG1655:3176137..3177618,W3110:3176771..3178252,REL606:3112287..3113768,DH10B:3273882..3275363 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3273882&end=3275363&gene=tolC&aa=mqmkkllpiliglslsgfsslsqaenlmqvyqqarlsnpelrksaadrdaafekinearspllpqlglgadytysngyrdanginsnatsaslqltqsifdmskwraltlqekaagiqdvtyqtdqqtlilntatayfnvlnaidvlsytqaqkeaiyrqldqttqrfnvglvaitdvqnaraqydtvlanevtarnnldnaveqlrqitgnyypelaalnvenfktdkpqpvnallkeaekrnlsllqarlsqdlareqirqaqdghlptldltastgisdtsysgsktrgaagtqyddsnmgqnkvglsfslpiyqggmvnsqvkqaqynfvgaseqlesahrsvvqtvrssfnninasissinaykqavvsaqssldameagysvgtrtivdvldatttlynakqelanarynylinqlniksalgtlneqdllalnnalskpvstnpenvapqtpeqnaiadgyapdspapvvqqtsartttsnghnpfrn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tolC+AND+escherichia+coli Pubmed(tolC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tolC Textpresso(tolC)] | |||
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Revision as of 23:28, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tolC |
|---|---|
| Gene Synonym(s) |
ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc[1] |
| Product Desc. |
TolC outer membrane channel[2][3] Outer membrane factor (OMF) of tripartite efflux pumps; channel-tunnel spanning the outer membrane and periplasm; homotrimeric; ColE1 tolerance[4] |
| Product Synonyms(s) |
transport channel[1], B3035[2][1], WeeA[2][1], Toc[2][1], RefI[2][1], MukA[2][1], MtcB[2][1], TolC[2][1] |
| Function from GO |
Biological Process
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
TolC, MdtQ, MdtP and CusC are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.