rplK:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rplK''  
''rplK''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3974, b3983, JW3946, relC''<ref name='LIB:Riley_2006'/>
''ECK3974, b3983, JW3946, relC''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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50S ribosomal subunit protein L11<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
50S ribosomal subunit protein L11<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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50S ribosomal subunit protein L11; kasugamycin sensitivity<ref name='LIB:EcoGene'/>
50S ribosomal subunit protein L11; kasugamycin sensitivity<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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50S ribosomal subunit protein L11<ref name='LIB:Riley_2006'/>, B3983<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RelC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
50S ribosomal subunit protein L11<ref name='LIB:Riley_2006'/>, B3983<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RelC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Biological Process'''
* GO:0006415 translational termination ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015968 stringent response ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0022625 cytosolic large ribosomal subunit ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rplKAJL-rpoBC|rplKAJL-rpoBC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rplKAJL-rpoBC|rplKAJL-rpoBC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rplK&loc=MG1655:4176470..4176898,W3110:3458234..3457806,DH10B:4276166..4276594,REL606:4158058..4158486 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4158058&end=4158486&gene=rplK&aa=makkvqayvklqvaagmanpsppvgpalgqqgvnimefckafnaktdsiekglpipvvitvyadrsftfvtktppaavllkkaagiksgsgkpnkdkvgkisraqlqeiaqtkaadmtgadieamtrsiegtarsmglvved Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rplK+AND+escherichia+coli Pubmed(rplK)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rplK Textpresso(rplK)]


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Revision as of 23:35, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rplK

Gene Synonym(s)

ECK3974, b3983, JW3946, relC[1]

Product Desc.

50S ribosomal subunit protein L11[2][3];

Component of 50S ribosomal subunit[3]; ribosome[2][3]

50S ribosomal subunit protein L11; kasugamycin sensitivity[4]

Product Synonyms(s)

50S ribosomal subunit protein L11[1], B3983[2][1], RelC[2][1], RplK[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rplKAJL-rpoBC[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rplK)    Textpresso(rplK)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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