Cis Element:DARS2: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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DARS2
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!align=left {{table_heading_style}} |Synonyms
!align=left {{table_heading_style}} |Synonyms
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!align=left {{table_heading_style}} |Function
!align=left {{table_heading_style}} |Function
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Recycling DnaA protein
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!align=left {{table_heading_style}} |Location
!align=left {{table_heading_style}} |Location
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!align=left {{table_heading_style}} |SO terms
!align=left {{table_heading_style}} |SO terms
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===Notes===
===Notes===
DnaA recycling sequences<ref name='PMID:19401329'/>
{{Category:DARS Elements}}


== Location and Sequence ==
== Location and Sequence ==
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!|Database!!Accession!!Notes
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[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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===Categories===
===Categories===
[[Category:Cis_Element]]
[[Category:Cis_Element|DARS2]]
[[Category:DARS_Elements]]
[[Category:DARS_Elements]]

Latest revision as of 08:40, 27 May 2013

Cis element summary table

Standard Name

DARS2

Synonyms
Function

Recycling DnaA protein

Location
SO terms


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Notes

DARS = DnaA reactivating sequences[1]. DARS elements contain clusters of DnaA binding sites. Binding to DARS sites promotes nucleotide exchange, releasing ADP and allowing DnaA to bind ATP.


Location and Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links
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Notes

Interactions

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Fujimitsu, K et al. (2009) Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev. 23 1221-33 PubMed

Categories

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