Cis Element:DARS1: Difference between revisions

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__NOTOC__
__NOTOC__
==Cis element summary table==
==Cis element summary table==
<newTableEdit>Template:Cis_element_summary_table</newTableEdit>
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|-
!align=left {{table_heading_style}} |Standard Name
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DARS1
|-
!align=left {{table_heading_style}} |Synonyms
||
 
|-
!align=left {{table_heading_style}} |Function
||
DnaA reactivation sequence
|-
!align=left {{table_heading_style}} |Location
||
 
|-
!align=left {{table_heading_style}} |SO terms
||
 
 
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===Notes===
===Notes===
{{Category:DARS Elements}}


== Location and Sequence ==
== Location and Sequence ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene_location_table</newTableEdit>
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!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
 
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===Notes===
===Notes===
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== Interactions==
== Interactions==
{{BacktoTop}}
{{BacktoTop}}
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!|Partner Type!!Partner!!Notes!!References!!Evidence
 
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===Notes===
===Notes===
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== Mutant alleles and phenotypes ==
== Mutant alleles and phenotypes ==
{{BacktoTop}}
{{BacktoTop}}
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!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
 
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===Notes===
===Notes===
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== Genetic Resources ==
== Genetic Resources ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene resource table </newTableEdit>  
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!|Resource!!Resource Type!!Source!!Notes/Reference
 
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===Notes===
===Notes===


== Accessions ==
== Accessions ==
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{{BacktoTop}}
<newTableEdit>Template:Gene accessions table</newTableEdit>
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!|Database!!Accession!!Notes
|-
|
[[EcoCyc]]
|
EcoCyc:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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===Categories===
===Categories===
[[Category:Cis_Element|DARS1]]
[[Category:DARS_Elements]]

Latest revision as of 08:40, 27 May 2013

Cis element summary table

Standard Name

DARS1

Synonyms
Function

DnaA reactivation sequence

Location
SO terms


edit table

Notes

DARS = DnaA reactivating sequences[1]. DARS elements contain clusters of DnaA binding sites. Binding to DARS sites promotes nucleotide exchange, releasing ADP and allowing DnaA to bind ATP.


Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links
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Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Fujimitsu, K et al. (2009) Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev. 23 1221-33 PubMed

Categories

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