hns:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
No edit summary
touch
 
(10 intermediate revisions by 2 users not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="N49aee8e9dea5b" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
''hns''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK1232, b1237, JW1225, bglY, cur, drc, drdX, drs, irk, mssyA, msyA, osmZ, pilG, topX, virR, hnsA, topS, B1, H1''<ref name='LIB:Riley_2006'/>, fimG, H1, verA''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
H-NS transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
DNA-binding global regulator H-NS; diverse mutant phenotypes affecting transcription, transposition, inversion, cryptic-gene expression; involved in chromosome organization; preferentially binds bent DNA; has N-terminal dimerization domain<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''global DNA-binding transcriptional dual regulator H-NS<ref name='LIB:Riley_2006'/>, B1237<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Irk<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsyA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TopS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TopX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VirR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Drs<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Drc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hns<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DrdX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BglY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HnsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OsmZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DNA-binding protein HLP-II (HU, BH2, HD, NS)<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , B1, bglY, cur, drc, drdX, drs, ECK1232, fimG, H1, hnsA, irk, JW1225, msyA, osmZ, pilG, topS, topX, verA, virR, b1237''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:hns|hns]]<ref name='LIB:EcoCyc10.6'/>, OP00190
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hns&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10457]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000450&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hns&loc=MG1655%3A1292145..1291732,W3110%3A1294499..1294086,DH10B%3A1332386..1331973,REL606%3A1292716..1292303,BW2952%3A1181230..1181643]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1181230&end=1181643&gene=hns&aa=msealkilnnirtlraqarectletleemleklevvvnerreeesaaaaeveertrklqqyremliadgidpnellnslaavksgtkakraqrpakysyvdengetktwtgqgrtpavikkamdeqgkslddflikq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hns+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hns]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4227.N49aee8e9dea5b&page=4227&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4227.N49aee8e9dea5b&page=4227&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4227.N49aee8e9dea5b--></protect>
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4227.N49aee8e9dea5b--></protect>

Latest revision as of 21:49, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hns

Gene Synonym(s)

ECK1232, b1237, JW1225, bglY, cur, drc, drdX, drs, irk, mssyA, msyA, osmZ, pilG, topX, virR, hnsA, topS, B1, H1[1], fimG, H1, verA

Product Desc.

H-NS transcriptional dual regulator[2][3]

DNA-binding global regulator H-NS; diverse mutant phenotypes affecting transcription, transposition, inversion, cryptic-gene expression; involved in chromosome organization; preferentially binds bent DNA; has N-terminal dimerization domain[4]

Product Synonyms(s)

global DNA-binding transcriptional dual regulator H-NS[1], B1237[2][1], Irk[2][1], MsyA[2][1], PilG[2][1], TopS[2][1], TopX[2][1], VirR[2][1], Drs[2][1], Drc[2][1], Cur[2][1], Hns[2][1], DrdX[2][1], BglY[2][1], HnsA[2][1], DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator[2][1], OsmZ[2][1], DNA-binding protein HLP-II (HU, BH2, HD, NS)[3][1] , B1, bglY, cur, drc, drdX, drs, ECK1232, fimG, H1, hnsA, irk, JW1225, msyA, osmZ, pilG, topS, topX, verA, virR, b1237

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hns[2], OP00190

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


HN-S forms heteromeric complexes with Hha and Cnu, which modulates HN-S function, expression and stability. Mutations affect chromosomal supercoiling. HT_Cmplx32_Mem: CspC+Hns+HupA.[4]



References

[back to top]


  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=hns:Quickview&oldid=1396831"