dnaX:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
No edit summary
touch
 
(11 intermediate revisions by 3 users not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="G49aee40e2a408" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
''dnaX''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK0464, b0470, JW0459, dnaZ''<ref name='LIB:Riley_2006'/>, dnaZ''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
* DNA polymerase III, gamma subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
* DNA polymerase III, tau subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
* Component of
** [[:Category:Complex:DNA polymerase III, preinitiation complex|DNA polymerase III, preinitiation complex]]<ref name='LIB:EcoCyc11.1'/>;
** [[:Category:Complex:DNA polymerase III, τ subunit dimer|DNA polymerase III, τ subunit dimer]]<ref name='LIB:EcoCyc11.1'/>
** [[:Category:Complex:DNA polymerase III, holoenzyme|DNA polymerase III, holoenzyme]]<ref name='LIB:EcoCyc11.1'/>
DNA polymerase III holoenzyme, tau and gamma ATPase subunits; gamma chain (aa 1-431) is main subunit of the clamp loader complex<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''DNA polymerase III/DNA elongation factor III, tau and gamma subunits<ref name='LIB:Riley_2006'/>, DnaZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0470<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , dnaZ, ECK0464, JW0459, b0470''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:dnaX|dnaX]]<ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dnaX&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10245]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000239&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dnaX&loc=MG1655%3A491316..493247,W3110%3A491316..493247,DH10B%3A430647..432578,REL606%3A464159..466090,BW2952%3A394075..396006]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=394075&end=396006&gene=dnaX&aa=msyqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpepevprqsfapvaptavmtptqvppqpqsapqqaptvplpettsqvlaarqqlqrvqgatkakksepaaatrarpvnnaalerlasvtdrvqarpvpsalekapakkeayrwkattpvmqqkevvatpkalkkalehektpelaaklaaeaierdpwaaqvsqlslpklveqvalnawkeesdnavclhlrssqrhlnnrgaqqklaealsmlkgstveltiveddnpavrtplewrqaiyeeklaqaresiiadnniqtlrrffdaeldeesirpi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dnaX+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dnaX]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2691.G49aee40e2a408&page=2691&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2691.G49aee40e2a408&page=2691&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2691.G49aee40e2a408--></protect>
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2691.G49aee40e2a408--></protect>

Latest revision as of 21:51, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dnaX

Gene Synonym(s)

ECK0464, b0470, JW0459, dnaZ[1], dnaZ

Product Desc.


DNA polymerase III holoenzyme, tau and gamma ATPase subunits; gamma chain (aa 1-431) is main subunit of the clamp loader complex[4]

Product Synonyms(s)

DNA polymerase III/DNA elongation factor III, tau and gamma subunits[1], DnaZ[2][1], B0470[2][1] , dnaZ, ECK0464, JW0459, b0470

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dnaX[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The tau chain is the full length protein. The gamma chain is formed by programmed ribosomal frameshifting at codon 431 to a premature stop codon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dnaX:Quickview&oldid=1397334"