uvrD:Quickview: Difference between revisions

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{|   id="T49b0281a7f221" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[uvrD:Gene|''uvrD]]'' (synonyms: ''ECK3808, b3813, JW3786, dar-2, dda, mutU, pdeB, rad, recL, srjC, uvr502, uvrE'')<ref name='LIB:Riley_2006'/>
''uvrD''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[uvrD:Gene_Product(s)|UvrD product]]<ref name='LIB:Riley_2006'/>: DNA-dependent ATPase I and helicase II product, B3813 product, UvrE product, SrjC product, Rad product, Dda product, RecL product, PdeB product, MutU product
''ECK3808, b3813, JW3786, dar-2, dda, mutU, pdeB, rad, recL, srjC, uvr502, uvrE''<ref name='LIB:Riley_2006'/>, uvrE''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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DNA-dependent ATPase I and helicase II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
DNA-dependent ATPase I and helicase II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:UvrABC Nucleotide Excision Repair Complex|UvrABC Nucleotide Excision Repair Complex]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:UvrABC Nucleotide Excision Repair Complex|UvrABC Nucleotide Excision Repair Complex]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


ATP-dependent 3'-5' DNA helicase II; unwinds forked DNA structures; dismantles the RecA nucleoprotein filament; increased rates of spontaneous mutagenesis<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-dependent ATPase I and helicase II<ref name='LIB:Riley_2006'/>, B3813<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UvrE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SrjC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rad<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dda<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PdeB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MutU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UvrD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , dar-2, dda, ECK3808, JW3786, mutU, pdeB, rad, recL, srjC, uvr502, uvrE, b3813''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uvrD|uvrD]]<ref name='LIB:EcoCyc10.6'/>, OP00099  
transcription unit(s): [[:Category:Txn_unit:uvrD|uvrD]]<ref name='LIB:EcoCyc10.6'/>, OP00099  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=uvrD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11064]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001053&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=uvrD&loc=MG1655%3A3996006..3998168,W3110%3A3638698..3636536,REL606%3A3959820..3961982,DH10B%3A4094926..4097088,BW2952%3A3885675..3887837]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3885675&end=3887837&gene=uvrD&aa=mdvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlianrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsyneededlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlygkevyhrpsrfigelpeecveevrlratvsrpvshqrmgtpmvendsgyklgqrvrhakfgegtivnmegsgehsrlqvafqgqgikwlvaayarlesv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uvrD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=uvrD]]&nbsp;&nbsp;


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===Notes===
===Notes===
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{{BacktoTop}}




Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

uvrD

Gene Synonym(s)

ECK3808, b3813, JW3786, dar-2, dda, mutU, pdeB, rad, recL, srjC, uvr502, uvrE[1], uvrE

Product Desc.

DNA-dependent ATPase I and helicase II[2][3];

Component of UvrABC Nucleotide Excision Repair Complex[2][3]

ATP-dependent 3'-5' DNA helicase II; unwinds forked DNA structures; dismantles the RecA nucleoprotein filament; increased rates of spontaneous mutagenesis[4]

Product Synonyms(s)

DNA-dependent ATPase I and helicase II[1], B3813[2][1], UvrE[2][1], SrjC[2][1], Rad[2][1], Dda[2][1], RecL[2][1], PdeB[2][1], MutU[2][1], UvrD[2][1] , dar-2, dda, ECK3808, JW3786, mutU, pdeB, rad, recL, srjC, uvr502, uvrE, b3813

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): uvrD[2], OP00099

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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