metK:Quickview: Difference between revisions

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{|   id="V49aeec703e356" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[metK:Gene|''metK]]'' (synonyms: ''ECK2937, b2942, JW2909, metX'')<ref name='LIB:Riley_2006'/>
''metK''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[metK:Gene_Product(s)|MetK product]]<ref name='LIB:Riley_2006'/>: methionine adenosyltransferase 1 product, B2942 product, MetX product
''ECK2937, b2942, JW2909, metX''<ref name='LIB:Riley_2006'/>, metX''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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MetK S-adenosylmethionine synthetase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
MetK S-adenosylmethionine synthetase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:methionine adenosyltransferase I|methionine adenosyltransferase I]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:methionine adenosyltransferase I|methionine adenosyltransferase I]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


S-adenosylmethionine synthase; methionine adenosyltransferase; ethionine sensitivity; essential gene<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''methionine adenosyltransferase 1<ref name='LIB:Riley_2006'/>, B2942<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2937, JW2909, metX, b2942''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:metK|metK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:metK|metK]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=metK&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10589]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000582&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=metK&loc=MG1655%3A3084728..3085882,W3110%3A3085362..3086516,DH10B%3A3179797..3180951,REL606%3A2972457..2973611,BW2952%3A2971876..2973030]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2971876&end=2973030&gene=metK&aa=makhlftsesvseghpdkiadqisdavldaileqdpkarvacetyvktgmvlvggeittsawvdieeitrntvreigyvhsdmgfdanscavlsaigkqspdinqgvdradpleqgagdqglmfgyatnetdvlmpapityahrlvqrqaevrkngtlpwlrpdaksqvtfqyddgkivgidavvlstqhseeidqkslqeavmeeiikpilpaewltsatkffinptgrfviggpmgdcgltgrkiivdtyggmarhgggafsgkdpskvdrsaayaaryvaknivaagladrceiqvsyaigvaeptsimvetfgtekvpseqltllvreffdlrpygliqmldllhpiyketaayghfgrehfpwektdkaqllrdaaglk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=metK+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=metK]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
The adjacent ORF yqgD has been removed from EcoGene because it is very unlikely to be a gene; the limited conservation with Salmonella is apparently due to a pseudotranslation of the conserved metK CRP site, promoter and the metK 5' UTR.<ref name='LIB:EcoGene'/>




Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

metK

Gene Synonym(s)

ECK2937, b2942, JW2909, metX[1], metX

Product Desc.

MetK S-adenosylmethionine synthetase[2][3];

Component of methionine adenosyltransferase I[2][3]

S-adenosylmethionine synthase; methionine adenosyltransferase; ethionine sensitivity; essential gene[4]

Product Synonyms(s)

methionine adenosyltransferase 1[1], B2942[2][1], MetX[2][1], MetK[2][1] , ECK2937, JW2909, metX, b2942

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): metK[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The adjacent ORF yqgD has been removed from EcoGene because it is very unlikely to be a gene; the limited conservation with Salmonella is apparently due to a pseudotranslation of the conserved metK CRP site, promoter and the metK 5' UTR.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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