rpsM:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3285, b3298, JW3260''<ref name='LIB:Riley_2006'/>
''ECK3285, b3298, JW3260''<ref name='LIB:Riley_2006'/>, JW3260''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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30S ribosomal subunit protein S13<ref name='LIB:Riley_2006'/>, B3298<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''30S ribosomal subunit protein S13<ref name='LIB:Riley_2006'/>, B3298<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3285, JW3260, b3298''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=rpsM&s=search PortEco search(rpsM)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=rpsM&loc=MG1655:3440493..3440137,W3110:4197945..4198301,DH10B:3538238..3537882,REL606:3370376..3370020,BW2952:3327294..3327650 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3327294&end=3327650&gene=rpsM&aa=mariaginipdhkhavialtsiygvgktrskailaaagiaedvkiselsegqidtlrdevakfvvegdlrreismsikrlmdlgcyrglrhrrglpvrgqrtktnartrkgprkpikk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsM+AND+escherichia+coli Pubmed(rpsM)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=rpsM Textpresso(rpsM)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rpsM&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10912]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000903&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rpsM&loc=MG1655%3A3440493..3440137,W3110%3A4197945..4198301,DH10B%3A3538238..3537882,REL606%3A3370376..3370020,BW2952%3A3327294..3327650]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3327294&end=3327650&gene=rpsM&aa=mariaginipdhkhavialtsiygvgktrskailaaagiaedvkiselsegqidtlrdevakfvvegdlrreismsikrlmdlgcyrglrhrrglpvrgqrtktnartrkgprkpikk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsM+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rpsM]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rpsM

Gene Synonym(s)

ECK3285, b3298, JW3260[1], JW3260

Product Desc.

30S ribosomal subunit protein S13[2][3];

Component of 30S ribosomal subunit[2][3]; ribosome[2][3]

30S ribosomal subunit protein S13[4]

Product Synonyms(s)

30S ribosomal subunit protein S13[1], B3298[2][1], RpsM[2][1] , ECK3285, JW3260, b3298

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rpsMKD-rpoA-rplQ[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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rpsM can be deleted, but null mutants grow slowly and express kanamycin resistance weakly (Bubunenko, 2007), which may explain why a deletion was not isolated by Baba (2006), leading to its misclassification as an essential gene.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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