rpsM:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000020142 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G14320 (score: 1.000; bootstrap: 99%)
  • AT1G77750 (score: 0.083)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000003431 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-020419-20 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-762 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0010411 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21399-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000211372 (score: 1.000; bootstrap: 100%)
  • ENSP00000354469 (score: 0.980)
  • ENSP00000352029 (score: 0.941)
  • ENSP00000328456 (score: 0.736)

From Inparanoid:20070104

Mus musculus

  • MGI:98146 (score: 1.000; bootstrap: 100%)
  • MGI:3644667 (score: 0.837)
  • MGI:3645266 (score: 0.821)
  • MGI:3644447 (score: 0.813)
  • MGI:3644672 (score: 0.802)
  • MGI:3647485 (score: 0.679)

From Inparanoid:20070104

Oryza gramene

  • Q75IA5 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030810 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000026184 (score: 0.953)
  • ENSPTRP00000039838 (score: 0.937)
  • ENSPTRP00000011287 (score: 0.740)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000046090 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000047371 (score: 0.976)
  • ENSRNOP00000030371 (score: 0.976)
  • ENSRNOP00000049793 (score: 0.925)
  • ENSRNOP00000040056 (score: 0.902)
  • ENSRNOP00000044731 (score: 0.654)
  • ENSRNOP00000040282 (score: 0.626)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNL081C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC17957 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000153006 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000043401 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPSM

From SHIGELLACYC

E. coli O157

RPSM

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:46946

Panther (EcoliWiki Page)

PTHR10871:SF1

Pfam (EcoliWiki Page)

PF00416 Ribosomal protein S13/S18

EcoCyc

EcoCyc:EG10912

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10912

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000903

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0905

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010809

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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