mutL:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01119 PF01119  DNA mismatch repair protein, C-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02518 PF02518  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08676 PF08676  MutL C terminal dimerisation domain]
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[[EcoCyc]]
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EcoCyc:EG11281
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11281
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001254
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1258
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013655
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:37, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014016 (score: 1.000; bootstrap: 93%)
  • ENSANGP00000013484 (score: 0.509)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000003921 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G09140 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000022288 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00041694 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004064 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000007136 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007598 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000005453 (score: 0.056)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1600 (score: 1.000; bootstrap: 93%)
  • ZDB-CDNA-040425-2534 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0232418 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0011659 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11026-PA (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000019676 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000231790 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000029671 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000016697 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Mus musculus

  • MGI:101938 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Oryza gramene

  • Q5JN46 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000032283 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000043097 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR167W (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC17034 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000142652 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029221001 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000010905 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Shigella flexneri

MUTL

From SHIGELLACYC

E. coli O157

MUTL

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01119 DNA mismatch repair protein, C-terminal domain

Pfam (EcoliWiki Page)

PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Panther (EcoliWiki Page)

PTHR10073:SF12

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

Superfamily (EcoliWiki Page)

SUPERFAMILY:55874

Superfamily (EcoliWiki Page)

SUPERFAMILY:118116

Pfam (EcoliWiki Page)

PF08676 MutL C terminal dimerisation domain

EcoCyc

EcoCyc:EG11281

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11281

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001254

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1258

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013655

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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