xerC:Evolution: Difference between revisions
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!|Organism!!Homologs (Statistics)!!Comments | !|Organism!!Homologs (Statistics)!!Comments | ||
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===Notes=== | ===Notes=== | ||
Neilson ''et al.'' (1999) describes site-specific recombination at ''dif'' by ''H. influenzae'' XerC<ref name='PMID:10048034'/>. | Neilson ''et al.'' (1999) describes site-specific recombination at ''dif'' by ''H. influenzae'' XerC<ref name='PMID:10048034'/>. They conclude the ''Hin''XerC and ''Hin''XerD can interact with their ''E.coli'' counterparts. | ||
==Families== | ==Families== | ||
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!|Database!!Accession!!Notes | !|Database!!Accession!!Notes | ||
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[http:// | [http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]]) | ||
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[http:// | [http://pfam.janelia.org/family/PF02899 PF02899 Phage integrase, N-terminal SAM-like domain] | ||
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]]) | |||
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=47823 SUPERFAMILY:47823] | |||
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]]) | |||
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=56349 SUPERFAMILY:56349] | |||
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]]) | |||
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[http://pfam.janelia.org/family/PF00589 PF00589 Phage integrase family] | |||
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[[EcoCyc]] | |||
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EcoCyc:EG11069 | |||
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
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[[EcoGene]] | |||
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EcoGene:EG11069 | |||
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
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[[RegulonDB]] | |||
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RegulonDB:ECK120001058 | |||
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
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[[EchoBASE]] | |||
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EchoBASE:EB1062 | |||
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
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[[ASAP]] | |||
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ASAP:ABE-0012448 | |||
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
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!|Name!!URL!!Comments | !|Name!!URL!!Comments | ||
Latest revision as of 08:37, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Homologs | Families | Links | References | Suggestions |
Homologs in Other Organisms
See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.
| Organism | Homologs (Statistics) | Comments |
|---|---|---|
|
Anopheles gambiae |
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From Inparanoid:20070104 |
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Apis mellifera |
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From Inparanoid:20070104 |
|
Shigella flexneri |
XERC |
From SHIGELLACYC |
|
E. coli O157 |
XERC |
From ECOO157CYC |
| edit table |
Do-It-Yourself Web Tools
Notes
Neilson et al. (1999) describes site-specific recombination at dif by H. influenzae XerC[1]. They conclude the HinXerC and HinXerD can interact with their E.coli counterparts.
Families
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
| edit table |
Notes
Member of the lambda integrase family of site-specific recombinases[2].
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ Neilson, L et al. (1999) Site-specific recombination at dif by Haemophilus influenzae XerC. Mol. Microbiol. 31 915-26 PubMed
- ↑ Colloms, SD et al. (1990) Recombination at ColE1 cer requires the Escherichia coli xerC gene product, a member of the lambda integrase family of site-specific recombinases. J. Bacteriol. 172 6973-80 PubMed
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