tolC:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|   id="H49b026cf1643c"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''tolC''  
''tolC''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc''<ref name='LIB:Riley_2006'/>
''ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc''<ref name='LIB:Riley_2006'/>, toc''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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transport channel<ref name='LIB:Riley_2006'/>, B3035<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WeeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Toc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RefI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MtcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''transport channel<ref name='LIB:Riley_2006'/>, B3035<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WeeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Toc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RefI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MtcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , colE1-i, ECK3026, JW5503, mtcB, mukA, refI, toc, weeA, b3035''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=tolC&loc=MG1655:3176137..3177618,W3110:3176771..3178252,REL606:3112287..3113768,DH10B:3273882..3275363 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3273882&end=3275363&gene=tolC&aa=mqmkkllpiliglslsgfsslsqaenlmqvyqqarlsnpelrksaadrdaafekinearspllpqlglgadytysngyrdanginsnatsaslqltqsifdmskwraltlqekaagiqdvtyqtdqqtlilntatayfnvlnaidvlsytqaqkeaiyrqldqttqrfnvglvaitdvqnaraqydtvlanevtarnnldnaveqlrqitgnyypelaalnvenfktdkpqpvnallkeaekrnlsllqarlsqdlareqirqaqdghlptldltastgisdtsysgsktrgaagtqyddsnmgqnkvglsfslpiyqggmvnsqvkqaqynfvgaseqlesahrsvvqtvrssfnninasissinaykqavvsaqssldameagysvgtrtivdvldatttlynakqelanarynylinqlniksalgtlneqdllalnnalskpvstnpenvapqtpeqnaiadgyapdspapvvqqtsartttsnghnpfrn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tolC+AND+escherichia+coli Pubmed(tolC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tolC Textpresso(tolC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tolC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11009]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000998&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tolC&loc=MG1655%3A3176137..3177618,W3110%3A3176771..3178252,REL606%3A3112287..3113768,DH10B%3A3273882..3275363,BW2952%3A3063285..3064766]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3063285&end=3064766&gene=tolC&aa=mqmkkllpiliglslsgfsslsqaenlmqvyqqarlsnpelrksaadrdaafekinearspllpqlglgadytysngyrdanginsnatsaslqltqsifdmskwraltlqekaagiqdvtyqtdqqtlilntatayfnvlnaidvlsytqaqkeaiyrqldqttqrfnvglvaitdvqnaraqydtvlanevtarnnldnaveqlrqitgnyypelaalnvenfktdkpqpvnallkeaekrnlsllqarlsqdlareqirqaqdghlptldltastgisdtsysgsktrgaagtqyddsnmgqnkvglsfslpiyqggmvnsqvkqaqynfvgaseqlesahrsvvqtvrssfnninasissinaykqavvsaqssldameagysvgtrtivdvldatttlynakqelanarynylinqlniksalgtlneqdllalnnalskpvstnpenvapqtpeqnaiadgyapdspapvvqqtsartttsnghnpfrn]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tolC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tolC]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tolC

Gene Synonym(s)

ECK3026, b3035, JW5503, colE1-i, mtcB, refI, weeA, mukA, toc[1], toc

Product Desc.

TolC outer membrane channel[2][3]

Outer membrane factor (OMF) of tripartite efflux pumps; channel-tunnel spanning the outer membrane and periplasm; homotrimeric; ColE1 tolerance[4]

Product Synonyms(s)

transport channel[1], B3035[2][1], WeeA[2][1], Toc[2][1], RefI[2][1], MukA[2][1], MtcB[2][1], TolC[2][1] , colE1-i, ECK3026, JW5503, mtcB, mukA, refI, toc, weeA, b3035

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tolC[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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TolC, MdtQ, MdtP and CusC are paralogs.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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