rpoC:Gene Product(s): Difference between revisions

Standard name	RpoC
Synonyms	RNA polymerase, beta prime subunit^[1], B3988^[2]^[1], TabB^[2]^[1], RpoC^[2]^[1] , ECK3979, JW3951, tabB, b3988
Product description	RNA polymerase, β' subunit^[2]^[3]; Component of RNA polymerase, core enzyme^[2]^[3]; RNA polymerase sigma 24^[2]^[3]; RNA polymerase sigma 38^[2]^[3]; RNA polymerase sigma32^[2]; RNA polymerase sigma 32^[3]; RNA polymerase sigma54^[2]; RNA polymerase sigma 54^[3]; RNA polymerase sigma70^[2]; RNA polymerase sigma 70^[3]; RNA polymerase sigma 19^[3]; RNA polymerase sigma 28^[3] RNA polymerase, beta' subunit; binds Zn(II)^[4]
EC number (for enzymes)	2.7.7.6^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0003677	DNA binding	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01322	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000722	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR006592	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007066	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007080	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007081	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007083	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003677	DNA binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR012754	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01322	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000722	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR006592	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007066	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007080	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007081	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007083	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR012754	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:spec GO_REF:0000003	IEA: Inferred from Electronic Annotation	EC:2.7.7.6	F	Seeded from EcoCyc (v14.0)	complete
	GO:0003899	DNA-directed RNA polymerase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0240	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005515	protein binding	PMID:10764785^[5]	IPI: Inferred from Physical Interaction	UniProtKB:P00579	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005515	protein binding	PMID:17960736^[6]	IPI: Inferred from Physical Interaction	UniProtKB:P0A8V2	F	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000722	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR006592	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007066	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007080	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007081	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007083	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR012754	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006350	transcription	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0804	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006351	transcription, DNA-dependent	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01322	P	Seeded from EcoCyc (v14.0)	complete
	GO:0016020	membrane	PMID:16858726^[7]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc (v14.0)	complete
	GO:0016740	transferase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016779	nucleotidyltransferase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0548	F	Seeded from EcoCyc (v14.0)	complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of RNA polymerase, core enzyme	could be indirect
Protein	sdhA		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	ycgE		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	ftsK		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	rhsD		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	yagS		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	lon		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	dnaK		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	metH		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	priA		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	rpoA		PMID:16606699^[8]	Experiment(s):EBI-1147184, EBI-1145418
Protein	ydfE		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	htpG		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	rplB		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	rpsA		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	clpB		PMID:16606699^[8]	Experiment(s):EBI-1147184
Protein	malP		PMID:15690043^[9]	Experiment(s):EBI-879261
Protein	rplB		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-883046
Protein	rplC		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-883046
Protein	rplM		PMID:15690043^[9]	Experiment(s):EBI-879261
Protein	rplO		PMID:15690043^[9]	Experiment(s):EBI-879261
Protein	rplQ		PMID:15690043^[9]	Experiment(s):EBI-879261
Protein	rpoA		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-879354, EBI-883046, EBI-883271
Protein	rpoB		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-879304, EBI-883046, EBI-883170
Protein	rpsD		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-883046
Protein	rpsE		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-883046
Protein	rpsG		PMID:15690043^[9]	Experiment(s):EBI-879261, EBI-883046
Protein	rpsM		PMID:15690043^[9]	Experiment(s):EBI-879261
Protein	ylbH		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	yfdV		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	cysQ		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	flxA		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	focA		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	hemC		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	hupA		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplI		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplP		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplS		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplV		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplX		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rpsC		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rpsJ		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rpsP		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	ygcP		PMID:15690043^[9]	Experiment(s):EBI-883046, EBI-891354
Protein	yjbH		PMID:15690043^[9]	Experiment(s):EBI-883046
Protein	rplP		PMID:19402753^[10]	LCMS(ID Probability):99.0
Protein	rpsD		PMID:19402753^[10]	LCMS(ID Probability):99.0 MALDI(Z-score):17.053160
Protein	hupA		PMID:19402753^[10]	LCMS(ID Probability):99.0 MALDI(Z-score):4.008937
Protein	malP		PMID:19402753^[10]	MALDI(Z-score):27.382239
Protein	rplB		PMID:19402753^[10]	LCMS(ID Probability):99.0 MALDI(Z-score):36.865190
Protein	nusG		PMID:19402753^[10]	LCMS(ID Probability):99.0 MALDI(Z-score):34.911932
Protein	Subunits of RNA polymerase sigma 24	could be indirect
Protein	Subunits of RNA polymerase sigma 38	could be indirect
Protein	Subunits of RNA polymerase sigma32	could be indirect
Protein	Subunits of RNA polymerase sigma54	could be indirect
Protein	Subunits of RNA polymerase sigma70	could be indirect
Protein	Subunits of RNA polymerase sigma 19	could be indirect
Protein	Subunits of RNA polymerase sigma 28	could be indirect
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source	Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERQQIL TEEQYLDALE EFGDEFDAKM GAEAIQALLK SMDLEQECEQ LREELNETNS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLTGP KEAERLYRSG LASLHARVKV RITEYEKDAN GELVAKTSLK DTTVGRAILW MIVPKGLPYS IVNQALGKKA ISKMLNTCYR ILGLKPTVIF ADQIMYTGFA YAARSGASVG IDDMVIPEKK HEIISEAEAE VAEIQEQFQS GLVTAGERYN KVIDIWAAAN DRVSKAMMDN LQTETVINRD GQEEKQVSFN SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI MMTPVIEGGD VKEPLRDRVL GRVTAEDVLK PGTADILVPR NTLLHEQWCD LLEENSVDAV KVRSVVSCDT DFGVCAHCYG RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGSIKL SNVKSVVNSS GKLVITSRNT ELKLIDEFGR TKESYKVPYG AVLAKGDGEQ VAGGETVANW DPHTMPVITE VSGFVRFTDM IDGQTITRQT DELTGLSSLV VLDSAERTAG GKDLRPALKI VDAQGNDVLI PGTDMPAQYF LPGKAIVQLE DGVQISSGDT LARIPQESGG TKDITGGLPR VADLFEARRP KEPAILAEIS GIVSFGKETK GKRRLVITPV DGSDPYEEMI PKWRQLNVFE GERVERGDVI SDGPEAPHDI LRLRGVHAVT RYIVNEVQDV YRLQGVKIND KHIEVIVRQM LRKATIVNAG SSDFLEGEQV EYSRVKIANR ELEANGKVGA TYSRDLLGIT KASLATESFI SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRAAGEAPA APQVTAEDAS ASLAELLNAG LGGSDNE
Length	1,407
Mol. Wt	155.163 kDa
pI	7.1 (calculated)
Extinction coefficient	100,160 - 102,035 (calc based on 34 Y, 9 W, and 15 C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	References
Domain	14..342	PF04997 RNA polymerase Rpb1, domain 1	PMID:19920124^[11]
Domain	344..486	PF00623 RNA polymerase Rpb1, domain 2	PMID:19920124^[11]
Domain	489..644	PF04983 RNA polymerase Rpb1, domain 3	PMID:19920124^[11]
Domain	673..764	PF05000 RNA polymerase Rpb1, domain 4	PMID:19920124^[11]
Domain	766..1322	PF04998 RNA polymerase Rpb1, domain 5	PMID:19920124^[11]
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=rpoC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16131818	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:948487	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0013043	Escherichia coli str. K-12 substr. MG1655
UniProt (EcoliWiki Page)	UniProtKB/Swiss-Prot:P0A8T7	Escherichia coli str. K-12 substr. MG1655
EcoCyc	EcoCyc:EG10895	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG10895	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:948487	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120000886	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB0888	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 ^3.6 ^3.7 ^3.8 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ Arthur, TM et al. (2000) Mutational analysis of beta '260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase. J. Biol. Chem. 275 23113-9 PubMed
↑ Weerasekera, R et al. (2007) Interactome and interface protocol (2IP): a novel strategy for high sensitivity topology mapping of protein complexes. Proteomics 7 3835-52 PubMed
↑ Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed
↑ ^8.00 ^8.01 ^8.02 ^8.03 ^8.04 ^8.05 ^8.06 ^8.07 ^8.08 ^8.09 ^8.10 ^8.11 ^8.12 ^8.13 ^8.14 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
↑ ^9.00 ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 ^9.10 ^9.11 ^9.12 ^9.13 ^9.14 ^9.15 ^9.16 ^9.17 ^9.18 ^9.19 ^9.20 ^9.21 ^9.22 ^9.23 ^9.24 ^9.25 ^9.26 ^9.27 ^9.28 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
↑ ^10.0 ^10.1 ^10.2 ^10.3 ^10.4 ^10.5 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
↑ ^11.0 ^11.1 ^11.2 ^11.3 ^11.4 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

rpoC:Gene Product(s): Difference between revisions

Latest revision as of 21:11, 17 February 2015

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 35: / Line 35: @@
 *
 ****************************************************************************************** -->{{Product_nomenclature_help}}
-{|  id="L46ab13b305209"  class=" tableEdit Product_nomenclature_table"
+{|   id="L46ab13b305209"  class=" tableEdit Product_nomenclature_table"
 |-
-!align=left  |Standard name
+!align=left {{table heading style}} |Standard name
 ||
 RpoC
 |-
-!align=left  |Synonyms
+!align=left {{table heading style}} |Synonyms
 ||
-RNA polymerase, beta prime subunit<ref name='LIB:Riley_2006'/>, B3988<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TabB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+''RNA polymerase, beta prime subunit<ref name='LIB:Riley_2006'/>, B3988<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TabB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3979, JW3951, tabB, b3988''
 |-
-!align=left  |Product description
+!align=left {{table heading style}} |Product description
 ||
 RNA polymerase, &beta;' subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
@@ Line 54: / Line 54: @@
 RNA polymerase, beta' subunit; binds Zn(II)<ref name='LIB:EcoGene'/>
 |-
-!align=left  |EC number (for enzymes)
+!align=left {{table heading style}} |EC number (for enzymes)
 ||
 * [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6]<ref name='LIB:Riley_2006'/>
@@ Line 77: / Line 77: @@
 *
 ****************************************************************************************** -->{{Product_GO_help}}
-{|   id="Y46ab13b846589"  class=" tableEdit GO_table_product dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Y46ab13b846589"  class=" tableEdit GO_table_product dataTable"
-|-
+|- {{table_heading_style}}
-!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:hamap<br />GO_REF:0000020
+|
+IEA: Inferred from Electronic Annotation
+|
+HAMAP:MF_01322
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000722
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR006592
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007066
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007080
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003677
+|
+DNA binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007081
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
 |-
 |
 |
-GO:0016779
+GO:0003677
 |
-nucleotidyltransferase activity
+DNA binding
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0548
+InterPro:IPR007083
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 103: / Line 217: @@
 |
-GO:0016740
+GO:0003677
 |
-transferase activity
+DNA binding
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0808
+InterPro:IPR012754
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 122: / Line 236: @@
 |
-GO:0006351
+GO:0003899
 |
-transcription, DNA-dependent
+DNA-directed RNA polymerase activity
 |
-GO_REF:0000020
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
@@ Line 132: / Line 246: @@
 HAMAP:MF_01322
 |
-P
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003899
+|
+DNA-directed RNA polymerase activity
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000722
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003899
+|
+DNA-directed RNA polymerase activity
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR006592
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003899
+|
+DNA-directed RNA polymerase activity
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007066
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003899
+|
+DNA-directed RNA polymerase activity
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007080
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0003899
+|
+DNA-directed RNA polymerase activity
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007081
+|
+F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 141: / Line 350: @@
 |
-GO:0006350
+GO:0003899
 |
-transcription
+DNA-directed RNA polymerase activity
 |
-GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR000722<br />InterPro:IPR006592<br />InterPro:IPR007066<br />InterPro:IPR007080<br />InterPro:IPR007081<br />InterPro:IPR007083<br />InterPro:IPR012754<br />SP_KW:KW-0804
+InterPro:IPR007083
 |
-P
+F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 160: / Line 369: @@
 |
-GO:0005634
+GO:0003899
 |
-nucleus
+DNA-directed RNA polymerase activity
 |
-GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR000722
+InterPro:IPR012754
 |
-C
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 183: / Line 392: @@
 DNA-directed RNA polymerase activity
 |
-GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000003<br />GO_REF:0000004<br />GO_REF:0000020
+GOA:spec<br />GO_REF:0000003
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR000722<br />InterPro:IPR006592<br />InterPro:IPR007066<br />InterPro:IPR007080<br />InterPro:IPR007081<br />InterPro:IPR007083<br />InterPro:IPR012754<br />EC:2.7.7.6<br />SP_KW:KW-0240<br />HAMAP:MF_01322
+EC:2.7.7.6
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 198: / Line 407: @@
 |
-GO:0003677
+GO:0003899
 |
-DNA binding
+DNA-directed RNA polymerase activity
 |
-GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000020
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR000722<br />InterPro:IPR006592<br />InterPro:IPR007066<br />InterPro:IPR007080<br />InterPro:IPR007081<br />InterPro:IPR007083<br />InterPro:IPR012754<br />HAMAP:MF_01322
+SP_KW:KW-0240
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 221: / Line 430: @@
 protein binding
 |
-PMID:15690043<br />PMID:15690043
+PMID:10764785
 |
 IPI: Inferred from Physical Interaction
 |
-UniProtKB:P0A6Z3<br />UniProtKB:P69441
+UniProtKB:P00579
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005515
+|
+protein binding
+|
+PMID:17960736
+|
+IPI: Inferred from Physical Interaction
+|
+UniProtKB:P0A8V2
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000722
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR006592
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007066
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007080
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007081
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR007083
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006350
+|
+transcription
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR012754
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 236: / Line 597: @@
 |
-GO:0005737
+GO:0006350
 |
-cytoplasm
+transcription
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0804
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006351
+|
+transcription, DNA-dependent
+|
+GOA:hamap<br />GO_REF:0000020
+|
+IEA: Inferred from Electronic Annotation
+|
+HAMAP:MF_01322
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0016020
+|
+membrane
 |
 PMID:16858726
@@ Line 248: / Line 647: @@
 C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0016740
+|
+transferase activity
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0808
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0016779
+|
+nucleotidyltransferase activity
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0548
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 265: / Line 702: @@
 *
 ****************************************************************************************** -->{{Product_interactions_help}}
-{|   id="F46ab13c4cc7a7"  class=" tableEdit Product_interactions_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F46ab13c4cc7a7"  class=" tableEdit Product_interactions_table dataTable"
-|-
+|- {{table heading style}}
 !|Partner Type!!Partner!!Notes!!References!!Evidence
 |-
@@ Line 763: / Line 1,200: @@
 |
 Experiment(s):EBI-883046<br />
+|-
+|
+Protein
+|
+rplP
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0
+|-
+|
+Protein
+|
+rpsD
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0 MALDI(Z-score):17.053160
+|-
+|
+Protein
+|
+hupA
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0 MALDI(Z-score):4.008937
+|-
+|
+Protein
+|
+malP
+|
+|
+PMID:19402753
+|
+MALDI(Z-score):27.382239
+|-
+|
+Protein
+|
+rplB
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0 MALDI(Z-score):36.865190
+|-
+|
+Protein
+|
+nusG
+|
+|
+PMID:19402753
+|
+LCMS(ID Probability):99.0 MALDI(Z-score):34.911932
 |-
 |
@@ Line 858: / Line 1,361: @@
 *
 ****************************************************************************************** -->{{Product_localization_help}}
-{|   id="M46a89af373d46"  class=" tableEdit Product_localization_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M46a89af373d46"  class=" tableEdit Product_localization_table"
-|-
+|- {{table heading style}}
-!|Compartment!!Description!!Evidence!!Source!!Notes
+!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
 |- class="tableEdit_footer"
@@ Line 883: / Line 1,386: @@
 *
 ****************************************************************************************** -->{{Product_physical_properties_help}}
-{|  id="G46ab13ccd3268"  class=" tableEdit Product_phys_prop_table"
+{|   id="G46ab13ccd3268"  class=" tableEdit Product_phys_prop_table"
 |-
-!align=left  |Sequence
+!align=left {{table heading style}} |Name
+||
+|-
+!align=left {{table heading style}} |Sequence
 ||
 [http://biocyc.org/ECOLI/sequence-aa?object=RPOC-MONOMER at EcoCyc]
@@ Line 914: / Line 1,421: @@
 APQVTAEDAS ASLAELLNAG LGGSDNE</pre>
 |-
-!align=left  |Length
+!align=left {{table heading style}} |Length
 ||
 ,407
 |-
-!align=left  |Mol. Wt
+!align=left {{table heading style}} |Mol. Wt
 ||
 .163 kDa
 |-
-!align=left  |pI
+!align=left {{table heading style}} |pI
 ||
 .1 (calculated)
 |-
-!align=left  |Extinction coefficient
+!align=left {{table heading style}} |Extinction coefficient
 ||
 ,160 - 102,035 (calc based on 34 Y, 9 W, and 15 C residues)
@@ Line 945: / Line 1,452: @@
 *
 ****************************************************************************************** -->{{Product_domains_motifs_help}}
-{|   id="Y46ab13cd589e9"  class=" tableEdit Product_motif_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Y46ab13cd589e9"  class=" tableEdit Product_motif_table dataTable"
-|-
+|- {{table heading style}}
-!|Type!!Residues!!Description!!Notes
+!|Type!!Residues!!Description!!Notes!!References
+|-
+|
+Domain
+|
+..342
+|
+[http://pfam.janelia.org/family/PF04997 PF04997  RNA polymerase Rpb1, domain 1]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..486
+|
+[http://pfam.janelia.org/family/PF00623 PF00623  RNA polymerase Rpb1, domain 2]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..644
+|
+[http://pfam.janelia.org/family/PF04983 PF04983  RNA polymerase Rpb1, domain 3]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..764
+|
+[http://pfam.janelia.org/family/PF05000 PF05000  RNA polymerase Rpb1, domain 4]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..1322
+|
+[http://pfam.janelia.org/family/PF04998 PF04998  RNA polymerase Rpb1, domain 5]
+|
+|
+PMID:19920124
 |- class="tableEdit_footer"
-|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.28637.Y46ab13cd589e9&page=28637&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table]</span> || || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.28637.Y46ab13cd589e9&page=28637&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table]</span> || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.28637.Y46ab13cd589e9--></td>
@@ Line 970: / Line 1,532: @@
 *
 ****************************************************************************************** -->{{Product_structure_help}}
-{|  id="Z46a89af51d3fb"  class=" tableEdit Product_structure_table"
+{|   id="Z46a89af51d3fb"  class=" tableEdit Product_structure_table"
 |-
-!align=left  |Structures
+!align=left {{table heading style}} |Structures
 ||
 <beststructure>
@@ Line 980: / Line 1,542: @@
 </beststructure>
 |-
-!align=left  |Models
+!align=left {{table heading style}} |Models
 ||
 View models at:
-* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
+* [http://www.proteinmodelportal.org/query/uniprot/P0A8T7 Protein Model Portal]
-* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase]
+* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0A8T7 PSI-PRED (P0A8T7)]
-* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
+* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0A8T7 Genomes TO Protein (P0A8T7)] (GTOP)
-* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
-* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
 |- class="tableEdit_footer"
@@ Line 1,028: / Line 1,588: @@
 *
 ****************************************************************************************** -->{{Product_resources_help}}
-{|   id="D46ab13ce31fe1"  class=" tableEdit Product_resource_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D46ab13ce31fe1"  class=" tableEdit Product_resource_table"
-|-
+|- {{table_heading_style}}
 !|Resource type!!Source!!Notes/Reference
@@ Line 1,050: / Line 1,610: @@
 *
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|   id="D46ab13ce9916c"  class=" tableEdit Gene_accessions_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D46ab13ce9916c"  class=" tableEdit Gene_accessions_table"
-|-
+|- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |-
 |
-[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/16131818 GI:16131818]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/NP_418415.1 GeneID:948487]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[ASAP]]
+|
+ASAP:ABE-0013043
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+|
+[http://www.uniprot.org/uniprot/P0A8T7 UniProtKB/Swiss-Prot:P0A8T7]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[EcoCyc]]
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=RPOC-MONOMER EcoCyc:RPOC-MONOMER]
+EcoCyc:EG10895
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://swissmodel.expasy.org/repository/ SwissModel] ([[SwissModel|EcoliWiki Page]])
+[[EcoGene]]
 |
-[http://swissmodel.expasy.org/repository/smr.php?job=2&sptr_ac=P0A8T7 SwissModel:P0A8T7]
+EcoGene:EG10895
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
 |
-[[uniprot:P0A8T7|UniProt:P0A8T7]]
+[http://www.ncbi.nlm.nih.gov/gene?term=948487 GeneID:948487]
 |
+Escherichia coli str. K-12 substr. MG1655
 |-
 |
-[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[[RegulonDB]]
 |
-[http://pfam.sanger.ac.uk/family?acc=PF04997 PFAM:PF04997]
+RegulonDB:ECK120000886
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[[EchoBASE]]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_418415 RefSeq:NP_418415]
+EchoBASE:EB0888
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |- class="tableEdit_footer"
@@ Line 1,107: / Line 1,695: @@
 *
 ****************************************************************************************** -->
-{|   id="Q46a89af98a4b5"  class=" tableEdit Links_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Q46a89af98a4b5"  class=" tableEdit Links_table"
-|-
+|- {{table_heading_style}}
 !|Name!!URL!!Comments
@@ Line 1,128: / Line 1,716: @@
 {{BacktoTop}}
 [[Category:Proteins]]
-[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0006350_!_transcription]][[Category:Complex:RNA polymerase, core enzyme]][[Category:Complex:RNA polymerase sigma 24]][[Category:Complex:RNA polymerase sigma 38]][[Category:Complex:RNA polymerase sigma32]][[Category:Complex:RNA polymerase sigma54]][[Category:Complex:RNA polymerase sigma70]][[Category:Complex:RNA polymerase sigma 19]][[Category:Complex:RNA polymerase sigma 28]]

rpoC:Gene Product(s): Difference between revisions

Latest revision as of 21:11, 17 February 2015

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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