allR:Gene: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
Data loaded by TableEdit_Loader.
touch
 
(18 intermediate revisions by 2 users not shown)
Line 14: Line 14:
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
Line 31: Line 33:
*  
*  
****************************************************************************************** -->{{Gene_nomenclature_help}}
****************************************************************************************** -->{{Gene_nomenclature_help}}
{| id="I46a9b23b556aa"  class=" tableEdit Gene_nomenclature_table"   
{|   id="I46a9b23b556aa"  class=" tableEdit Gene_nomenclature_table"   


|-
|-
!align=left |Standard name
!align=left {{table_heading_style}} |Standard name
||
||
''allR''  
''allR''
|-
|-
!align=left |Mnemonic
!align=left {{table_heading_style}} |Mnemonic
||
||
 
Allantoin
|-
|-
!align=left |Synonyms
!align=left {{table_heading_style}} |Synonyms
||
||
''ECK0499, b0506, JW0494, gclR, glxA3, ybbU''<ref name='LIB:Riley_2006'/>
''ECK0499, b0506, JW0494, gclR, glxA3, ybbU''<ref name='LIB:Riley_2006'/>, ybbU''


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 65: Line 67:
*  
*  
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|   id="K46a9b23bcdcf6"  class=" tableEdit Gene_location_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K46a9b23bcdcf6"  class=" tableEdit Gene_location_table"   
|-
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-  
|-  
Line 74: Line 76:
11.47 minutes&nbsp;
11.47 minutes&nbsp;
|
|
MG1655: 532235..533050<br />{{GBrowseFigureByCoord|532235|533050|ecoli|MG1655}}
MG1655: 532235..533050<br /><gbrowseImage>
name=NC_000913:532235..533050
source=MG1655
preset=GeneLocation
</gbrowseImage>
 
|
|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=G6276 EcoCyc]
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=G6276 EcoCyc]
{{GBrowseLink|ecoli|NC_000913|531235|534050|GBrowse(MG1655)}}
{{GBrowseLink|MG1655|NC_000913|531235|534050|GBrowse(MG1655)}}
   
   
|
|
{{GBrowseFastaLink|ecoli|NC_000913|532235|533050|FASTA Dump}}
{{GBrowseFastaLink|MG1655|NC_000913|532235|533050|FASTA Dump}}
*[http://biocyc.org/ECOLI/sequence?object=G6276 EcoCyc Sequence Dump]  
*[http://biocyc.org/ECOLI/sequence?object=G6276 EcoCyc Sequence Dump]  
|-  
|-  
Line 88: Line 95:


|
|
NC_012967: 505177..505992<br />{{GBrowseFigureByCoord|505177|505992|REL606|NC_012967}}
NC_012967: 505177..505992<br /><gbrowseImage>
name=NC_012967:505177..505992
source=REL606
preset=GeneLocation
</gbrowseImage>
 
|
|
{{GBrowseLink|REL606|NC_012967|505177|505992|GBrowse (REL606)}}
{{GBrowseLink|REL606|NC_012967|505177|505992|GBrowse (REL606)}}
|
|
{{GBrowseFastaLink|REL606|NC_012967|505177|505992|FASTA Dump}}  
{{GBrowseFastaLink|REL606|NC_012967|505177|505992|FASTA Dump}}  
|-
|
[[BW2952]]
|
|
NC_012759: 434994..435809<br /><gbrowseImage>
name=NC_012759:434994..435809
source=BW2952
preset=GeneLocation
</gbrowseImage>
|
{{GBrowseLink|BW2952|NC_012759|434994|435809|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|434994|435809|FASTA Dump}}
|-  
|-  
|
|
Line 99: Line 127:
&nbsp;
&nbsp;
|
|
W3110: 532235..533050<br />{{GBrowseFigureByCoord|532235|533050|ecoli_W3110|W3110}}
W3110: 532235..533050<br /><gbrowseImage>
name=NC_007779:532235..533050
source=W3110
preset=GeneLocation
</gbrowseImage>
 
|
|
{{GBrowseLink|ecoli_W3110|AC_000091|531235|534050|GBrowse(W3110)}}  
{{GBrowseLink|W3110|NC_007779|531235|534050|GBrowse(W3110)}}  
|
|
{{GBrowseFastaLink|ecoli_W3110|AC_000091|532235|533050|FASTA Dump}}  
{{GBrowseFastaLink|W3110|NC_007779|532235|533050|FASTA Dump}}  
|-  
|-  
|
|
Line 110: Line 143:


|
|
DH10B: 471566..472381<br />{{GBrowseFigureByCoord|471566|472381|ecoli_DH10B|DH10B}}
DH10B: 471566..472381<br /><gbrowseImage>
name=NC_010473:471566..472381
source=DH10B
preset=GeneLocation
</gbrowseImage>
 
|
|
{{GBrowseLink|ecoli_DH10B|NC_010473|469936|474011|GBrowse(DH10B)}}
{{GBrowseLink|DH10B|NC_010473|469936|474011|GBrowse(DH10B)}}
|
|
{{GBrowseFastaLink|ecoli_DH10B|NC_010473|469936|474011|FASTA Dump}}  
{{GBrowseFastaLink|DH10B|NC_010473|469936|474011|FASTA Dump}}  


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 134: Line 172:
*  
*  
****************************************************************************************** -->{{Gene_sequence_features_help}}
****************************************************************************************** -->{{Gene_sequence_features_help}}
{|   id="A46a9b23c768f6"  class=" tableEdit Gene_sequence_features_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A46a9b23c768f6"  class=" tableEdit Gene_sequence_features_table"   
|-
|- {{table_heading_style}}
!|Feature type!!Location!!Description
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11575.A46a9b23c768f6&page=11575&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11575.A46a9b23c768f6&page=11575&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.11575.A46a9b23c768f6-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.11575.A46a9b23c768f6-->
Line 156: Line 194:
*  
*  
****************************************************************************************** -->{{Gene_alleles_help}}
****************************************************************************************** -->{{Gene_alleles_help}}
{| {{Prettytable}} id="K46a9b23cb6d75"  class=" tableEdit Gene_allele_table dataTable"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="K46a9b23cb6d75"  class=" tableEdit Gene_allele_table dataTable"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
Line 204: Line 242:
|
|
Loss of repressor activity. Loss of DNA binding. Reduces assembly into functionally active tetramers
Loss of repressor activity. Loss of DNA binding. Reduces assembly into functionally active tetramers
|
|
|
seeded from [http://www.uniprot.org/uniprot/P0ACN4 UniProt:P0ACN4]
|-
|
allRS236A,M
|
|
S236A,M
|
|
Slightly reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA
|
|


Line 234: Line 289:
|
|
L215A
L215A
|
|
Reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA
|
|
|
seeded from [http://www.uniprot.org/uniprot/P0ACN4 UniProt:P0ACN4]
|-
|
allRS234A,N
|
|
S234A,N
|
|


Line 278: Line 350:
|
|
   
   
|-
|
allRS234A,N
|


|
|- class="tableEdit_footer"
S234A,N
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11575.K46a9b23cb6d75&page=11575&pagename={{FULLPAGENAMEE}}&type=&template=Gene_allele_table edit table]</span> || || || || || || ||
|
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.11575.K46a9b23cb6d75-->
 
<protect><!--Alleles_notes--></protect>
===Notes===


|
Reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA
|


|


|
==Genetic Interactions==
seeded from [http://www.uniprot.org/uniprot/P0ACN4 UniProt:P0ACN4]
{{BacktoTop}}
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.11575.Y4e04b736ac8ae-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. **
*
****************************************************************************************** -->{{Genetic_interaction_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Y4e04b736ac8ae"  class=" tableEdit Genetic_interaction_table dataTable" 
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11575.K46a9b23cb6d75&page=11575&pagename={{FULLPAGENAMEE}}&type=&template=Gene_allele_table edit table]</span> || || || || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.11575.Y4e04b736ac8ae&page=11575&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table]</span> || || || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.11575.K46a9b23cb6d75-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.11575.Y4e04b736ac8ae--></protect>


<protect><!--Alleles_notes--></protect>
<!-- Genetic Interacdtions Notes -->
===Notes===
===Notes===


==Genetic Resources==
==Genetic Resources==
Line 314: Line 391:
*  
*  
****************************************************************************************** -->{{Gene_resources_help}}
****************************************************************************************** -->{{Gene_resources_help}}
{|   id="V46a9b23d5f1ca"  class=" tableEdit Gene_resource_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="V46a9b23d5f1ca"  class=" tableEdit Gene_resource_table"   
|-
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference
|-  
|-  
Line 332: Line 409:


Primer 2:CCTGGATGTGCTTTCAGTCCCAA  
Primer 2:CCTGGATGTGCTTTCAGTCCCAA  
|-
|
[[:Category:Kohara_Phage:8E4|8E4]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=155 Genobase]
|
PMID:3038334
|-
|
[[:Category:Kohara_Phage:9E5|9E5]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=156 Genobase]
|
PMID:3038334
|-  
|-  
|
|
Line 371: Line 466:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="M46a9b23de7b1b"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M46a9b23de7b1b"  class=" tableEdit Gene_accessions_table"   
|-
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
|
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
[[EcoCyc]]
|
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6276 EcoCyc:G6276]
EcoCyc:G6276
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])
[[EcoGene]]
|
|
[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB3382 EchoBASE:EB3382]
EcoGene:EG13616
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])
[[RegulonDB]]
|
|
[http://chase.ou.edu/macro/searchlink.php?bnum=b0506 EcoliGenExpDB:b0506]
RegulonDB:ECK120002884
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOL199310/ ECOL199310CYC] ([[ECOL199310CYC|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI|EcoliWiki Page]])
|
|
[http://BioCyc.org/ECOL199310/new-image?object=C0621 ECOL199310CYC:C0621]
[http://www.ncbi.nlm.nih.gov/gene?term=945333 GeneID:945333]
|
|
Escherichia coli str. K-12 substr. MG1655
|-  
|-  
|
|
[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])
[[EchoBASE]]
|
|
[http://ecogene.org/geneinfo.php?eg_id=EG13616 EcoGene:EG13616]
EchoBASE:EB3382
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOO157/ ECOO157CYC] ([[ECOO157CYC|EcoliWiki Page]])
[[ASAP]]
|
|
[http://BioCyc.org/ECOO157/new-image?object=YBBU ECOO157CYC:YBBU]
ASAP:ABE-0001750
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]  
|-  
|
[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] ([[ASAP|EcoliWikiPage]])
|
[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0001750&formSubmitReturn=1 ASAP:ABE-0001750]
|


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 442: Line 530:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="K46a6cfcd27a40"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K46a6cfcd27a40"  class=" tableEdit Links_table"   
|-
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments


Line 464: Line 552:
[[Category:Genes in the ASKA clone collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:all genes]][[Category:Gene_List:DH10B]][[Category:Gene_List:REL606]]
[[Category:all genes]][[Category:Gene_List:DH10B]][[Category:Gene_List:REL606]]
[[Category:Gene_List:BW2952]]

Latest revision as of 20:32, 19 September 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

[back to top]


See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

allR

Mnemonic

Allantoin

Synonyms

ECK0499, b0506, JW0494, gclR, glxA3, ybbU[1], ybbU

edit table


Notes

Location(s) and DNA Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

11.47 minutes 

MG1655: 532235..533050
<gbrowseImage> name=NC_000913:532235..533050 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 505177..505992
<gbrowseImage> name=NC_012967:505177..505992 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 434994..435809
<gbrowseImage> name=NC_012759:434994..435809 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 532235..533050
<gbrowseImage> name=NC_007779:532235..533050 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 471566..472381
<gbrowseImage> name=NC_010473:471566..472381 source=DH10B preset=GeneLocation </gbrowseImage>

edit table


Notes

Sequence Features

[back to top]


See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
edit table


Notes

Alleles and Phenotypes

[back to top]


See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

allRM141A

M141A

No effect on repressor activity. Loss of glyoxylate-triggered dissociation from DNA

seeded from UniProt:P0ACN4

allRC142W

C142W

Strongly reduced repressor activity. Reduces DNA binding. Prevents assembly into functionally active tetramers

seeded from UniProt:P0ACN4

allRCKSMVRMC135APA

CKSMVRMC135APA

Loss of repressor activity. Loss of DNA binding. Reduces assembly into functionally active tetramers

seeded from UniProt:P0ACN4

allRS236A,M

S236A,M

Slightly reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA

seeded from UniProt:P0ACN4

allRC217A,S

C217A,S

Slightly reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA

seeded from UniProt:P0ACN4

allRL215A

L215A

Reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA

seeded from UniProt:P0ACN4

allRS234A,N

S234A,N

Reduced repressor activity. Loss of glyoxylate-triggered dissociation from DNA

seeded from UniProt:P0ACN4

ΔallR (Keio:JW0494)

deletion

deletion

PMID:16738554[2]

Shigen
CGSC8639[3]

ΔallR789::kan

PMID:16738554[2]

CGSC:99978


edit table


Notes

Genetic Interactions

[back to top]



Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0494

Plasmid clone

Shigen

PMID:16769691[4]

Status:Clone OK

Primer 1:GCCACGGAAGTTAGACGGCGCGG

Primer 2:CCTGGATGTGCTTTCAGTCCCAA

8E4

Kohara Phage

Genobase

PMID:3038334[5]

9E5

Kohara Phage

Genobase

PMID:3038334[5]

gsk-3055::Tn10

Linked marker

CAG12154 = CGSC7341[3]

est. P1 cotransduction: 29% [6]
Synonyms:zbb-30-55::TnlO, zba-3055::Tn10

purK79::Tn10

Linked marker

CAG12171 = CGSC7342[3]

est. P1 cotransduction: 49% [6]
Synonyms:purE79::Tn10

edit table


Notes

Accessions in Other Databases

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:G6276

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13616

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002884

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945333

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3382

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001750

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



<protect>

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed
  3. ↑ 3.0 3.1 3.2 CGSC: The Coli Genetics Stock Center
  4. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed
  5. ↑ 5.0 5.1 Kohara, Y et al. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50 495-508 PubMed
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

Categories

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=allR:Gene&oldid=1476800"