rcsB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rcsB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2210, b2217, JW2205''<ref name='LIB:Riley_2006'/>, JW2205, viaA''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
Component of [[:Category:Complex:RcsB|RcsB]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Positive regulatory gene for capsule (colanic acid) synthesis; when overexpressed, restores ftsZ84 growth on low-salt medium<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding response regulator in two-component regulatory system with RcsC and YojN<ref name='LIB:Riley_2006'/>, B2217<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2210, JW2205, viaA, b2217''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rcsB|rcsB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rcsDB|rcsDB]]<ref name='LIB:EcoCyc11.1'/>
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rcsB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10821]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000812&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rcsB&loc=MG1655%3A2314199..2314849,W3110%3A2319511..2320161,DH10B%3A2405187..2405837,BW2952%3A2200004..2200654]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2200004&end=2200654&gene=rcsB&aa=mnnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsiktissqkksammklgvendiallnylssvtlspadkd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcsB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rcsB]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rcsB

Gene Synonym(s)

ECK2210, b2217, JW2205[1], JW2205, viaA

Product Desc.

RcsB[2][3];

Component of RcsB[2][3]

Positive regulatory gene for capsule (colanic acid) synthesis; when overexpressed, restores ftsZ84 growth on low-salt medium[4]

Product Synonyms(s)

DNA-binding response regulator in two-component regulatory system with RcsC and YojN[1], B2217[2][1], RcsB[2][1], positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)[2][1], regulator protein RcsB[2][1], unphosphorylated regulator protein RcsB[2][1], unmodified regulator protein RcsB[2][1] , ECK2210, JW2205, viaA, b2217

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rcsB[2], rcsDB[3]

Regulation/Activity
Quick Links



        

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Notes

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Binds TrxA (Kumar, 2004). HT_Cmplx42_Mem: RcsB+YfgM.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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