rcsB:Quickview: Difference between revisions

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{|   id="M49b021ce6486f"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rcsB:Gene|''rcsB]]'' (synonyms: ''ECK2210, b2217, JW2205'')<ref name='LIB:Riley_2006'/>
''rcsB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rcsB:Gene_Product(s)|RcsB product]]<ref name='LIB:Riley_2006'/>: DNA-binding response regulator in two-component regulatory system with RcsC and YojN product, B2217 product, positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) product, regulator protein RcsB product, unphosphorylated regulator protein RcsB product, unmodified regulator protein RcsB product
''ECK2210, b2217, JW2205''<ref name='LIB:Riley_2006'/>, JW2205, viaA''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RcsB|RcsB]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:RcsB|RcsB]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Positive regulatory gene for capsule (colanic acid) synthesis; when overexpressed, restores ftsZ84 growth on low-salt medium<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding response regulator in two-component regulatory system with RcsC and YojN<ref name='LIB:Riley_2006'/>, B2217<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified regulator protein RcsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2210, JW2205, viaA, b2217''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rcsB|rcsB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rcsDB|rcsDB]]<ref name='LIB:EcoCyc11.1'/>  
transcription unit(s): [[:Category:Txn_unit:rcsB|rcsB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rcsDB|rcsDB]]<ref name='LIB:EcoCyc11.1'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rcsB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10821]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000812&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rcsB&loc=MG1655%3A2314199..2314849,W3110%3A2319511..2320161,DH10B%3A2405187..2405837,BW2952%3A2200004..2200654]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2200004&end=2200654&gene=rcsB&aa=mnnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsiktissqkksammklgvendiallnylssvtlspadkd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcsB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rcsB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Binds TrxA (Kumar, 2004). HT_Cmplx42_Mem: RcsB+YfgM.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rcsB

Gene Synonym(s)

ECK2210, b2217, JW2205[1], JW2205, viaA

Product Desc.

RcsB[2][3];

Component of RcsB[2][3]

Positive regulatory gene for capsule (colanic acid) synthesis; when overexpressed, restores ftsZ84 growth on low-salt medium[4]

Product Synonyms(s)

DNA-binding response regulator in two-component regulatory system with RcsC and YojN[1], B2217[2][1], RcsB[2][1], positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)[2][1], regulator protein RcsB[2][1], unphosphorylated regulator protein RcsB[2][1], unmodified regulator protein RcsB[2][1] , ECK2210, JW2205, viaA, b2217

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rcsB[2], rcsDB[3]

Regulation/Activity
Quick Links



        

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Notes

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Binds TrxA (Kumar, 2004). HT_Cmplx42_Mem: RcsB+YfgM.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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