uvrD:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00580 PFAM:PF00580]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00580 PF00580  UvrD/REP helicase]
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[[EcoCyc]]
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EcoCyc:EG11064
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11064
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001053
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1057
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0012455
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:37, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026079 (score: 1.000; bootstrap: 100%)
  • YP_026251 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • YP_026251 (score: 1.000; bootstrap: 98%)
  • AT4G25120 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1354699 (score: 1.000; bootstrap: 100%)
  • YP_026251 (score: 0.063)

From Inparanoid:20070104

Oryza gramene

  • YP_026251 (score: 0.140)
  • Q6ZHK2 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026251 (score: 1.000; bootstrap: 96%)
  • YJL092W (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • YP_026251 (score: 0.096)
  • SPAC4H35 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

UVRD

From SHIGELLACYC

E. coli O157

UVRD

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Pfam (EcoliWiki Page)

PF00580 UvrD/REP helicase

EcoCyc

EcoCyc:EG11064

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11064

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001053

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1057

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012455

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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