folA:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00186 PFAM:PF00186]
[http://pfam.janelia.org/family/PF00186 PF00186 Dihydrofolate reductase]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11549:SF1 PTHR11549:SF1]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53597 SUPERFAMILY:53597]
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[[EcoCyc]]
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EcoCyc:EG10326
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10326
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000320
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0322
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000164
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000349 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000029347 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033316 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007974 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000005901 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000012960 (score: 0.813)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000005566 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-010406-5 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-31 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230113 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0004087 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA13324-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025076 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000343033 (score: 1.000; bootstrap: 100%)
  • ENSP00000302637 (score: 1.000; bootstrap: 100%)
  • ENSP00000319170 (score: 0.882)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000012897 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000024036 (score: 0.539)

From Inparanoid:20070104

Mus musculus

  • MGI:94890 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000029175 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000026122 (score: 0.602)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000018259 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR236W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000135205 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000134686 (score: 0.166)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00007900001 (score: 1.000; bootstrap: 100%)
  • GSTENP00015908001 (score: 0.140)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000049617 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

FOLA

From SHIGELLACYC

E. coli O157

Z0055

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00186 Dihydrofolate reductase

Panther (EcoliWiki Page)

PTHR11549:SF1

Superfamily (EcoliWiki Page)

SUPERFAMILY:53597

EcoCyc

EcoCyc:EG10326

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10326

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000320

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0322

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000164

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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