zapA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

ZapA

Synonyms

protein that localizes to the cytokinetic ring[1], B2910[2][1], ZapA[2][1], YgfE[2][1] , ECK2905, JW2878, ygfE, b2910

Product description

protein that localizes to the cytokinetic ring[2][3];

Component of protein that localizes to the cytokinetic ring[3]

FtsZ-associated protein[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000917

barrier septum formation

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_02012

P

Seeded from EcoCyc (v14.0)

complete

GO:0000917

barrier septum formation

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0717

P

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded from EcoCyc (v14.0)

complete

GO:0005886

plasma membrane

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_02012

C

Seeded from EcoCyc (v14.0)

complete

GO:0007049

cell cycle

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0131

P

Seeded from EcoCyc (v14.0)

complete

GO:0051301

cell division

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_02012

P

Seeded from EcoCyc (v14.0)

complete

GO:0051301

cell division

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0132

P

Seeded from EcoCyc (v14.0)

complete

GO:0005515

protein binding

PMID:20497333[5]

IPI: Inferred from Physical Interaction

EcoliWiki:zapA


F

complete

GO:0005515

protein binding

PMID:20497333[5]

IPI: Inferred from Physical Interaction

EcoliWiki:ftsZ


F

complete

GO:0005515

protein binding

PMID:20497333[5]

IPI: Inferred from Physical Interaction

EcoliWiki:ftsN


F

complete

GO:0005515

protein binding

PMID:20497333[5]

IPI: Inferred from Physical Interaction

EcoliWiki:ftsI


F

complete

GO:0000921

septin ring assembly

PMID:15630023[6]

IDA: Inferred from Direct Assay

P

complete

GO:0032155

cell division site part

PMID:15630023[6]

IDA: Inferred from Direct Assay

C

complete

GO:0051301

cell division

PMID:20487275[7]

IMP: Inferred from Mutant Phenotype

P

complete

GO:0044457

cell septum part

PMID:20487275[7]

IMP: Inferred from Mutant Phenotype

C

complete

GO:0000917

barrier septum formation

PMID:20487275[7]

IMP: Inferred from Mutant Phenotype

P

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of protein that localizes to the cytokinetic ring

could be indirect

Protein

thyA

PMID:16606699[8]

Experiment(s):EBI-1144280

Protein

lpxA

PMID:16606699[8]

Experiment(s):EBI-1144280

Protein

caiD

PMID:16606699[8]

Experiment(s):EBI-1144280
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MSAQPVDIQI FGRSLRVNCP PDQRDALNQA ADDLNQRLQD LKERTRVTNT EQLVFIAALN
ISYELAQEKA KTRDYAASME QRIRMLQQTI EQALLEQGRI TEKTNQNFE
Length

109

Mol. Wt

12.593 kDa

pI

5.0 (calculated)

Extinction coefficient

2,980 - 3,105 (calc based on 2 Y, 0 W, and 1 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

5..91

PF05164 Cell division protein ZapA

PMID:19920124[9]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=zapA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130812

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947404

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009554

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0ADS2

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12878

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12878

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947404

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002417

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2716

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 Alexeeva, S et al. (2010) Direct interactions of early and late assembling division proteins in Escherichia coli cells resolved by FRET. Mol. Microbiol. 77 384-98 PubMed
  6. ↑ 6.0 6.1 Goehring, NW et al. (2005) Premature targeting of a cell division protein to midcell allows dissection of divisome assembly in Escherichia coli. Genes Dev. 19 127-37 PubMed
  7. ↑ 7.0 7.1 7.2 Galli, E & Gerdes, K (2010) Spatial resolution of two bacterial cell division proteins: ZapA recruits ZapB to the inner face of the Z-ring. Mol. Microbiol. 76 1514-26 PubMed
  8. ↑ 8.0 8.1 8.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  9. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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