ytfI:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YtfI

Synonyms

predicted protein[1], B4215[2][1], YtfI[2][1] , ECK4211, JW5748, b4215

Product description

predicted protein[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MLPRIRHNNF IGAVELFVKS SYTKTHSNNF FNNIHHAFKK KDWISNYDSL LTLREFFRCA
TQIDKSGYQV LSSKNETVHA MDKFLISFSL KDNGAEYTMT LRGSGFEYEE IPITINEYNS
FMDFKNREFP LEQNRRLYAW DILQKKQSDI PKRIKGYIHQ AIGDVSLGYA LLEDIVSKLK
RGKFELQIPG GGIKECDGWY IYEKIIDDNF AIVIESLGFA LKIYGGDERF RNGSSVVLED
EDYSLIYNFL VNAGCQQVEL AEQVDAIVSA NLAADSDITK EKICEKYKST IEAFKKEQLA
LPVLVRRKNS ET
Length

312

Mol. Wt

35.936 kDa

pI

6.5 (calculated)

Extinction coefficient

38,850 - 39,350 (calc based on 15 Y, 3 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=ytfI taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:49176474

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948738

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013790

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P39317

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7870

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12509

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948738

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004365

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2402

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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