yphG:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YphG

Synonyms

conserved protein[1], B2549[2][1], YphG[2][1] , ECK2546, JW5405, b2549

Product description

conserved protein[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005488

binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011990

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MRDYSAKTLP DCSIHCHKSF NSVCLVNIEG TMTPVKVWQE RVEIPTYETG PQDIHPMFLE
NRVYQGSSGA VYPYGVTDTL SEQKTLKSWQ AVWLENDYIK VMILPELGGR VHRAWDKVKQ
RDFVYHNEVI KPALVGLLGP WISGGIEFNW PQHHRPTTFM PVDFTLEAHE DGAQTVWVGE
TEPMHGLQVM TGFTLRPDRA ALEIASRVYN GNATPRHFLW WANPAVKGGE GHQSVFPPDV
TAVFDHGKRA VSAFPIATGT YYKVDYSAGV DISRYKNVPV PTSYMAEKSQ YDFVGAWCHD
EDGGLLHVAN HHIAPGKKQW SWGHSEFGQA WDKSLTDNNG PYIELMTGIF ADNQPDFTWL
DAYEEKRFEQ YFLPYHSLGM VQNASRDAVI KLQRSKRGIE WGLYAISPLN GYRLAIREIG
KCNALLDDAV ALMPATAIQG VLHGINPERL TIELSDADGN IVLSYQEHQP QALPLPDVAK
APLAAQDITS TDEAWFIGQH LEQYHHASRS PFDYYLRGVA LDPLDYRCNL ALAMLEYNRA
DFPQAVAYAT QALKRAHALN KNPQCGQASL IRASAYERQG QYQQAEEDFW RAVWSGNSKA
GGYYGLARLA ARNGNFDAGL DFCQQSLRAC PTNQEVLCLH NLLLVLSGRQ DNARVQREKL
LRDYPLNATL WWLNWFDGRS ESALAQWRGL CQGRDVNALM TAGQLINWGM PTLAAEMLNA
LDCQRTLPLY LQASLLPKAE RGELVAKAID VFPQFVRFPN TLEEVAALES IEECWFARHL
LACFYYNKRS YNKAIAFWQR CVEMSPEFAD GWRGLAIHAW NKQHDYELAA RYLDNAYQLA
PQDARLLFER DLLDKLSGAT PEKRLARLEN NLEIALKRDD MTAELLNLWH LTGQADKAAD
ILATRKFHPW EGGEGKVTSQ FILNQLLRAW QHLDARQPQQ ACELLHAALH YPENLSEGRL
PGQTDNDIWF WQAICANAQG DETEATRCLR LAATGDRTIN IHSYYNDQPV DYLFWQGMAL
RLLGEQQTAQ QLFSEMKQWA QEMAKTSIEA DFFAVSQPDL LSLYGDLQQQ HKEKCLMVAM
LASAGLGEVA QYESARAELT AINPAWPKAA LFTTVMPFIF NRVH
Length

1,124

Mol. Wt

127.285 kDa

pI

6.1 (calculated)

Extinction coefficient

259,550 - 261,925 (calc based on 45 Y, 35 W, and 19 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=yphG taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:162135907

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947021

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008380

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P76585

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7343

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13468

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947021

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003913

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3241

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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