ypeA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YpeA

Synonyms

predicted acyltransferase with acyl-CoA N-acyltransferase domain[1], B2434[2][1], YpeA[2][1] , ECK2429, JW2427, b2434

Product description

predicted acyltransferase with acyl-CoA N-acyltransferase domain[2][3]

Putative acetyltransferase[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0008080

N-acetyltransferase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000182

F

Seeded from EcoCyc (v14.0)

complete

GO:0008152

metabolic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000182

P

Seeded from EcoCyc (v14.0)

complete

GO:0008415

acyltransferase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0012

F

Seeded from EcoCyc (v14.0)

complete

GO:0016740

transferase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0808

F

Seeded from EcoCyc (v14.0)

complete

GO:0016747

transferase activity, transferring acyl groups other than amino-acyl groups

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01127

F

Seeded from EcoCyc (v14.0)

complete

GO:0003674

molecular function

n/a

ND: No biological Data available

F

Missing: reference

GO:0008150

biological process

n/a

ND: No biological Data available

P

Missing: reference

GO:0005575

cellular component

n/a

ND: No biological Data available

C

Missing: reference

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

ymgA

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

rplB

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

phnN

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

rpsC

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

yfdS

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

rpmB

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

rplY

PMID:16606699[5]

Experiment(s):EBI-1142812

Protein

dnaN

PMID:19402753[6]

MALDI(Z-score):18.575418

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MTTPHYATFS TDFRQILANS TVHAIISLLT RKKVTNTMEI RVFRQEDFEE VITLWERCDL
LRPWNDPEMD IERKMNHDVS LFLVAEVNGD VVGTVMGGYD GHRGSAYYLG VHPEFRGRGI
ANALLNRLEK KLIARGCPKI QINVPEDNDM VLGMYERLGY EHADVLSLGK RLIEDEEY
Length

178

Mol. Wt

20.472 kDa

pI

5.4 (calculated)

Extinction coefficient

21,430 - 21,680 (calc based on 7 Y, 2 W, and 2 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

48..124

PF00583 Acetyltransferase (GNAT) family

PMID:19920124[7]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=ypeA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111435

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946917

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008028

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P76539

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7269

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14168

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946917

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003843

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3920

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  6. ↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  7. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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