yncG:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YncG

Synonyms

predicted enzyme[1], B1454[2][1], YncG[2][1] , ECK1448, JW1449, b1454

Product description

putative transferase[2]; hypothetical GST-like protein[3]

Function unknown, glutathione S-transferase homolog[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0016740

transferase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0808

F

Seeded from EcoCyc (v14.0)

complete

GO:0003674

molecular function

n/a

ND: No biological Data available

F

Missing: reference

GO:0005575

cellular component

n/a

ND: No biological Data available

C

Missing: reference

GO:0008150

biological process

n/a

ND: No biological Data available

P

Missing: reference

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

yncC

PMID:16606699[5]

Experiment(s):EBI-1139871

Protein

groL

PMID:16606699[5]

Experiment(s):EBI-1139871

Protein

slyD

PMID:16606699[5]

Experiment(s):EBI-1139871

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MIKVYGVPGW GSTISELMLT LADIPYQFVD VSGFDHEGAS RELLKTLNPL CQVPTLALEN
DEIMTETAAI ALMVLDRRPD LAPPVGRAER QLFQRLLVWL VANVYPTFTF ADYPERWAPD
APEQLKKNVI EYRKSLYIWL NSQLTAEPYA FGEQLTLVDC YLCTMRTWGP GHEWFQDNAT
NISAIADAVC QLPKLQEVLK RNEII
Length

205

Mol. Wt

23.32 kDa

pI

4.5 (calculated)

Extinction coefficient

44,920 - 45,420 (calc based on 8 Y, 6 W, and 4 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yncG taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16129413

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946023

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004851

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P76117

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G6765

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13777

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946023

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003354

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3539

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed

Categories

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