ykfC:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YkfC |
|---|---|
| Synonyms |
CP4-6 prophage; conserved protein[1], B0258[2][1], YkfC[2][1] , ECK0260, JW5813, b0258 |
| Product description |
hypothetical protein[2]; CP4-6 prophage; conserved protein[3] |
| EC number (for enzymes) |
|
| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003723 |
RNA binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0003964 |
RNA-directed DNA polymerase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0006278 |
RNA-dependent DNA replication |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0003674 |
molecular function |
N/A |
ND: No biological Data available |
F |
Missing: reference | |||
| GO:0005575 |
cellular component |
N/A |
ND: No biological Data available |
C |
Missing: reference | |||
| GO:0008150 |
biological process |
N/A |
ND: No biological Data available |
P |
Missing: reference | |||
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MQRKLATWAA TDPSLRIQRL LRLITQPEWL AEAARITLSS KGAHTPGVDG VNKTMLQARL AVELQILRDE LLSGHYQPLP ARRVYIPKSN GKLRPLGIPA LRDRIVQRAM LMAMEPIWES DFHTLSYGFR PERSVHHAIR TVKLQLTDCG ETRGRWVIEG DLSSYFDTVH HRLLMKAVRR RISDARFMTL LWKTIKAGHI DVGLFRAASE GVPQGGVISP LLSNIMLNEF DQYLHERYLS GKARKDRWYW NNSIQRGRST AVRENWQWKP AVAYCRYADD FVLIVKGTKA QVEAIREECR GVLEGSLKLR LNMDKTKIPH VNDGFIFLGH RLIRKRSRYG EMRVVSTIPQ EKARNFAASL TALLWKVRIS GEILLG |
| Length |
376 |
| Mol. Wt |
43.166 kDa |
| pI |
10.7 (calculated) |
| Extinction coefficient |
69,900 - 70,275 (calc based on 10 Y, 10 W, and 3 C residues) |
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Domains/Motifs/Modification Sites
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
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