yjgL:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YjgL

Synonyms

predicted protein[1], B4253[2][1], YjgL[2][1] , ECK4246, JW5757, b4253

Product description

conserved protein[2]; predicted protein[3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rplW

PMID:15690043[5]

Experiment(s):EBI-893060
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MLRRSYSLKE FVMSKISDLN YSQHITLADN FKQKSEVLNT WRVGMNDFAR IAGGQDNRRN
ILSPGAFLEF LAKIFTLGYV DFSKRSNEAG RNMMAHIKSS SYSKDTNGNE KMKFYMNNPV
GERADSPKVI IEISLSTITT MGTRQGHTAI IFPQPDGSTN RYEGKSFERK DESSLHLITN
KVLACYQSEA NKKIARLLNN NQELNNLQKL NNLQKLNNLL KLNNIQGLNN PQELNNPQNL
NDSQELNNSQ ELNSPQELND PQELNNSQDL NNSKVSCTVS VDSTITGLLK EPLNNALLAI
RNEHLLLMPH VCDESISYLL GEKGILEEID KLYALNDHGI DNDKVGNNEI NDIKVNLSHI
LIDSLDDAKV NLTPVIDSIL ETFSKSPYIN DVRILDWCFN KSMQYFDDTK KIKHACSVIN
HINLRSDQSK IAETLFFNLD KEPYKNSPEL QGLIWNKLVV YVNEFNLSNR EKTNLIQRLF
DNVESIFNEV PVSILVNDIF MNDFFMKNPE MINWYFPQLL KSYEGEKIYF DNLKYDLNDN
DKESNKEILK NQPDNVIKEK LNNEYKLRFR MMQTILQSRV NVLPYINEQR LNKLNPPENL
RIAIEHFGWK NRPITA
Length

616

Mol. Wt

71.091 kDa

pI

6.3 (calculated)

Extinction coefficient

55,810 - 56,435 (calc based on 19 Y, 5 W, and 5 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=yjgL taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111714

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948776

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013925

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P39336

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7884

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12531

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948776

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004379

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2421

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed

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