yjeJ:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YjeJ

Synonyms

predicted protein[1], B4145[2][1], YjeJ[2][1] , ECK4139, JW4105, b4145

Product description

predicted protein[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

pflB

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

pepD

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

rpsB

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

ykgF

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

gyrA

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

yahG

PMID:16606699[5]

Experiment(s):EBI-1147552

Protein

nuoG

PMID:16606699[5]

Experiment(s):EBI-1147552

</protect>

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MAISIKGVNT GVIRKSNNFI ALALKIKEPR NKESLFFMSV MELRDLLIAL ESRLHQKHKL
DAAAHLQYEQ ARDKVIKKMA ENIPEILVDE LKNADINRRV NTLELTDNQG ENLTFVLTLH
DGSKCELVVN ELQIEMLARA IIHAINNAEM RELALRITSL LDFLPLYDVD CQDNGNLEYD
TYSQPEWKHN LFDHYLAVLY RFKDESGKEQ FSGAVVKTRE ATPGKEIEAI TRRMLDFSPR
LKKLAGVPCQ VYVRTVAANN AQPLTQDQCL RALHHLRVQS TSKTAPQAK
Length

289

Mol. Wt

32.947 kDa

pI

7.9 (calculated)

Extinction coefficient

15,930 - 16,430 (calc based on 7 Y, 1 W, and 4 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yjeJ taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131970

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948663

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013575

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P39279

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7835

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12472

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948663

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004331

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2365

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed

Categories

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