yijP:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

YijP

Synonyms

conserved inner membrane protein[1], B3955[2][1], YijP[2][1] , ECK3946, JW3927, b3955

Product description

conserved inner membrane protein[2][3]

Function unknown, EptAB family; required for invasion of K1 into brain microvascular endothelial cells[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

plasma membrane


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MHSTEVQAKP LFSWKALGWA LLYFWFFSTL LQAIIYISGY SGTNGIRDSL LFSSLWLIPV
FLFPKRIKII AAVIGVVLWA ASLAALCYYV IYGQEFSQSV LFVMFETNTN EASEYLSQYF
SLKIVLIALA YTAVAVLLWT RLRPVYIPKP WRYVVSFALL YGLILHPIAM NTFIKNKPFE
KTLDNLASRM EPAAPWQFLT GYYQYRQQLN SLTKLLNENN ALPPLANFKD ESGNEPRTLV
LVIGESTQRG RMSLYGYPRE TTPELDALHK TDPNLTVFNN VVTSRPYTIE ILQQALTFAN
EKNPDLYLTQ PSLMNMMKQA GYKTFWITNQ QTMTARNTML TVFSRQTDKQ YYMNQQRTQS
AREYDTNVLK PFQEVLNDPA PKKLIIVHLL GTHIKYKYRY PENQGKFDGN TDHVPPGLNA
EELESYNDYD NANLYNDHVV ASLIKDFKAA NPNGFLVYFS DHGEEVYDTP PHKTQGRNED
NPTRHMYTIP FLLWTSEKWQ ATHPRDFSQD VDRKYSLAEL IHTWSDLAGL SYDGYDPTRS
VVNPQFKETT RWIGNPYKKN ALIDYDTLPY GDQVGNQ
Length

577

Mol. Wt

66.611 kDa

pI

7.4 (calculated)

Extinction coefficient

128,120 - 128,245 (calc based on 38 Y, 13 W, and 1 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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tmhmm.php?gene=yijP&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yijP taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131793

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948458

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012947

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P32678

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11914

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11914

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948458

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001842

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1858

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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