yhhZ:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

YhhZ

Synonyms

conserved protein[1], B3442[2][1], YhhZ[2][1] , ECK3428, JW3406, b3442

Product description

conserved protein[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MSNIVYLTVT GEQQGSISAG CGTSESTGNR WQSGHEDEIF TFSLLNNINN TGLGSQFHGI
TFCKLIDKST PLFINSINNN EQLFMGFDFY RINRFGRLEK YYYIQLRGAF LSAIHHQIIE
NQLDTETITI SYEFILCQHL IANTEFSYLA LPENYNRLFL PNSKNQTNNR FKTLNSKAIG
RLLAAGGVYN GNIEGFRDTA EKLGGDAIKG YDQILNEKTA GIAIATASIL LTKRSNVDTY
TEINSYLGKL RGQQKLLDGI DIIEIIYIKR PSKDLANLRK EFNKTVRKNF LIKLAKTSEA
SGRFNAEDLL RMRKGNVPLN YNVHHKLSLD DGGTNDFENL VLIENEPYHK VFTNMQSRIA
KGILVGESKI TPWAIPSGSI YPPMKNIMDH TK
Length

392

Mol. Wt

44.233 kDa

pI

9.1 (calculated)

Extinction coefficient

34,840 - 35,215 (calc based on 16 Y, 2 W, and 3 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

6..140

PF05638 Protein of unknown function (DUF796)

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yhhZ taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131314

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947952

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011244

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P46855

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7759

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12946

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947952

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004299

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2780

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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