yheT:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YheT

Synonyms

predicted hydrolase[1], B3353[2][1], YheT[2][1] , ECK3341, JW3316, b3353

Product description

predicted hydrolase[2][3]

Function unknown; predicted to have alpha/beta hydrolase fold[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0050526

poly(3-hydroxybutyrate) depolymerase activity

PMID:10091664[5]

ISM: Inferred from Sequence Model

InterPro: IPR010127

F

complete

GO:0004091

carboxylesterase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012020

F

Seeded from EcoCyc (v14.0)

complete

GO:0004091

carboxylesterase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0719

F

Seeded from EcoCyc (v14.0)

complete

GO:0016787

hydrolase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0378

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rpsT

PMID:16606699[6]

Experiment(s):EBI-1145667

Protein

groL

PMID:16606699[6]

Experiment(s):EBI-1145667
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MAQITTTDAN EFSSSAEFIP MRGFSNCHLQ TMLPRLFRRQ VKFTPYWQRL ELPDGDFVDL
AWSENPAQAQ HKPRLVVFHG LEGSLNSPYA HGLVEAAQKR GWLGVVMHFR GCSGEPNRMH
RIYHSGETED ASWFLRWLQR EFGHAPTAAV GYSLGGNMLA CLLAKEGNDL PVDAAVIVSA
PFMLEACSYH MEKGFSRVYQ RYLLNLLKAN AARKLAAYPG TLPINLAQLK SVRRIREFDD
LITARIHGYA DAIDYYRQCS AMPMLNRIAK PTLIIHAKDD PFMDHQVIPK PESLPPQVEY
QLTEHGGHVG FIGGTLLHPQ MWLESRIPDW LTTYLEAKSC
Length

340

Mol. Wt

38.495 kDa

pI

7.8 (calculated)

Extinction coefficient

57,870 - 58,620 (calc based on 13 Y, 7 W, and 6 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

102..315

PF00561 alpha/beta hydrolase fold

PMID:19920124[7]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yheT taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131232

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947855

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010957

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P45524

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7718

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12904

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947855

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004263

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2741

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Rychlewski, L et al. (1999) Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 8 614-24 PubMed
  6. ↑ 6.0 6.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  7. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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