yhdP:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

YhdP

Synonyms

conserved membrane protein, predicted transporter[1], B4472[2][1], YhdQ[2][1], YhdR[2][1], YhdP[2][1] , ECK3234, JW5542, yhdQ, yhdR, b4472

Product description

conserved membrane protein, predicted transporter[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MRRLPGILLL TGAALVVIAA LLVSGLRIAL PHLDAWRPEI LNKIESATGM PVEASQLSAS
WQNFGPTLEA HDIRAELKDG GEFSVKRVTL ALDVWQSLLH MRWQFRDLTF WQLRFRTNTP
ITSGGSDDSL EASHISDLFL RQFDHFDLRD SEVSFLTPSG QRAELAIPQL TWLNDPRRHR
AEGLVSLSSL TGQHGVMQVR MDLRDDEGLL SNGRVWLQAD DIDLKPWLGK WMQDNIALET
AQFSLEGWMT IDKGDVTGGD VWLKQGGASW LGEKQTHTLS VDNLTAHITR ENPGWQFSIP
DTRITMDGKP WPSGALTLAW IPEQDVGGKD NKRSDELRIR ASNLELAGLE GIRPLAAKLS
PALGDVWRST QPSGKINTLA LDIPLQAADK TRFQASWSDL AWKQWKLLPG AEHFSGTLSG
SVENGLLTAS MKQAKMPYET VFRAPLEIAD GQATISWLNN NKGFQLDGRN IDVKAKAVHA
RGGFRYLQPA NDEPWLGILA GISTDDGSQA WRYFPENLMG KDLVDYLSGA IQGGEADNAT
LVYGGNPQLF PYKHNEGQFE VLVPLRNAKF AFQPDWPALT NLDIELDFIN DGLWMKTDGV
NLGGVRASNL TAVIPDYSKE KLLIDADIKG PGKAVGPYFD ETPLKDSLGA TLQELQLDGD
VNARLHLDIP LNGELVTAKG EVTLRNNSLF IKPLDSTLKN LSGKFSFINS DLQSEPLTAS
WFNQPLNVDF STKEGAKAYQ VAVNLNGNWQ PAKTGVLPEA VNEALSGSVA WDGKVGIDLP
YHAGATYNIE LNGDLKNVSS HLPSPLAKPA GEPLAVNVKV DGNLNSFELT GQAGADNHFN
SRWLLGQKLT LDRAIWAADS KTLPPLPEQS GVELNMPPMN GAEWLALFQK GAAESVGGAA
SFPQHITLRT PMLSLGNQQW NNLSIVSQPT ANGTLVEAQG REINATLAMR NNAPWLANIK
YLYYNPSVAK TRGDSTPSSP FPTTERINFR GWPDAQIRCT ECWFWGQKFG RIDSDITISG
DTLTLTNGLI DTGFSRLTAD GEWVNNPGNE RTSLKGKLRG QKIDAAAEFF GVTTPIRQSS
FNVDYDLHWR KAPWQPDEAT LNGIIHTQLG KGEITEINTG HAGQLLRLLS VDALMRKLRF
DFRDTFGEGF YFDSIRSTAW IKDGVMHTDD TLVDGLEADI AMKGSVNLVR RDLNMEAVVA
PEISATVGVA AAFAVNPIVG AAVFAASKVL GPLWSKVSIL RYHISGPLDD PQINEVLRQP
RKEKAQ
Length

1,266

Mol. Wt

139.057 kDa

pI

5.4 (calculated)

Extinction coefficient

245,330 - 245,580 (calc based on 17 Y, 40 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

motif

1-29

UniProt Manual:Signal Peptides

UniProt:P46474


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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yhdP taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:49176330

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:2847740

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0174102

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P46474

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7690

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12827

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:2847740

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004237

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2678

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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