yfjH:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

YfjH

Synonyms

CP4-57 prophage; predicted protein[1], B2623[2][1], YfjH[2][1] , ECK2619, JW2603, b2623

Product description

CP4-57 prophage; predicted protein[2]; CP4-57 prophage; putative histone[3]

Function unknown, CP4-57 putative defective prophage[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MGIFKAKNPC TKNTIFTTSN TLIYGGFMIS LNDFYEQICR KRRDLAYHMS ECEWAVDTDV
LEEDHPEIRI ELGRMREQFW SSEKIGTRVR LYSCDVPWET RHHTVNGQLE IKEEYTELYD
PAQECWKNLS SNLTKETFLP LVIEPFSIND IFKAHLMFAS ISFFWGKSIM SENENVAFKA
FHRAAELFDK CIGMTWFNIS VCNQKKLSEV RRSAGKKGGK SKAEVYHIIQ LKLVELINDS
VPNDGWKNKV VAVNELIEPL WDFIQMSEFE INNQNKKYRV ATMSQDALVD TILNQWSLKN
EDVKQAFDSA VRRKKRSK
Length

318

Mol. Wt

37.139 kDa

pI

7.7 (calculated)

Extinction coefficient

61,420 - 62,295 (calc based on 8 Y, 9 W, and 7 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=yfjH taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130541

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946123

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008632

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P52123

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7359

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13194

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946123

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003927

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2986

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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