yehL:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YehL

Synonyms

predicted transporter subunit: ATP-binding component of ABC superfamily[1], YehL[2][1], B2119[2][1] , ECK2111, JW5349, b2119

Product description

putative transport protein (ABC superfamily, atp_bind)[2]; predicted transporter subunit: ATP-binding component of ABC superfamily[3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003593

F

Seeded from EcoCyc (v14.0)

complete

GO:0005524

ATP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011704

F

Seeded from EcoCyc (v14.0)

complete

GO:0016887

ATPase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011704

F

Seeded from EcoCyc (v14.0)

complete

GO:0017111

nucleoside-triphosphatase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003593

F

Seeded from EcoCyc (v14.0)

complete

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MRQTFIARKI SFISLIHFRD EYMSPQNNHL QRPPAAVLYA DELAKLKQND NAPCPPGWQL
SLPAARAFIL GDEAQNISRK VVISPSAVER MLVTLATGRG LMLVGEPGTA KSLLSELLAT
AISGDAGLTI QGGASTTEDQ IKYGWNYALL INHGPSTEAL VPAPLYQGMR DGKIVRFEEI
TRTPLEVQDC LLGMLSDRVM TGPELTGEAS QLYAREGFNI IATANTRDRG VNEMSAALKR
RFDFETVFPI MDFAQELELV ASASARLLAH SGIPHKVPDA VLELLVRTFR DLRANGEKKT
SMDTLTAIMS TAEAVNVAHA VGVRAWFLAN RAGEPADLVE CIAGTIVKDN EEDRARLRRY
FEQRVATHKE AHWQAYYQAR HRLP
Length

384

Mol. Wt

42.437 kDa

pI

7.0 (calculated)

Extinction coefficient

35,410 - 35,785 (calc based on 9 Y, 4 W, and 3 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

78..220

PF07728 AAA domain (dynein-related subfamily)

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yehL taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111389

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946656

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007006

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P33348

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11998

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11998

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946656

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001919

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1938

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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