yciW:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YciW

Synonyms

predicted oxidoreductase[1], B1287[2][1], YciW[2][1] , ECK1282, JW5200, b1287

Product description

predicted oxidoreductase[2][3]

Function unknown[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MLSPIRLSPL PALRQDNDFL YDQGAPMEQR HITGKSHWYH ETQSSTTEYD VLPLVPEAAK
VSDPFLLDVI LEKETLAPFL SWLDPARVLA VDLFPDQLTV TRSQTFTAYE RLSTALTVAQ
VCGVQRLCNY YSARLTPLPG PDSTRESNHR LAQITQYARQ LASSPSIIDN RSRQHLNDVG
LTAWDCVIIS QIIGFIGFQA RTIATFQAYL GHPVRWLPGL EIQNYADASL FADESLRWRS
SYEVEKLPEE HTKSSTAELC QLAEILSLHP ISLSLLEKLL NSTRGNTQPD NQLAALLCAR
INGSPACFAT CMDSSNEYKK ISTLMRKGEN EINQWADRHS VERATVQAIQ WLTRAPDRFS
AAQFSPLLEH EKSSTQIINL LVWSGLCGWI NRLKIALGET Y
Length

401

Mol. Wt

45.131 kDa

pI

6.2 (calculated)

Extinction coefficient

67,380 - 68,380 (calc based on 12 Y, 9 W, and 8 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=yciW taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111242

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945859

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004322

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P76035

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G6640

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14262

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945859

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003235

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB4010

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

Categories

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