yaiP:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

YaiP

Synonyms

predicted glucosyltransferase[1], B0363[2][1], YaiP[2][1] , ECK0360, JW0355, b0363

Product description

predicted glucosyltransferase[2][3]

Function unknown, related to intercellular adhesion proteins and glucosyltransferases[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0006974

response to DNA damage stimulus

PMID:11967071[5]

IEP: Inferred from Expression Pattern

P

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MKTWIFICMS IAMLLWFLST LRRKPSQKKG CIDAIIPAYN EGPCLAQSLD NLLRNPYFCR
VICVNDGSTD NTEAVMAEVK RKWGDRFVAV TQKNTGKGGA LMNGLNYATC DQVFLSDADT
YVPPDQDGMG YMLAEIERGA DAVGGIPSTA LKGAGLLPHI RATVKLPMIV MKRTLQQLLG
GAPFIISGAC GMFRTDVLRK FGFSDRTKVE DLDLTWTLVA NGYRIRQANR CIVYPQECNS
PREEWRRWRR WIVGYAVCMR LHKRLLFSRF GIFSIFPMLL VVLYGVGIYL TTWFNEFITT
GPHGVVLAMF PLIWVGVVCV IGAFSAWFHR CWLLVPLAPL SVVYVLLAYA IWIIYGLIAF
FTGREPQRDK PTRYSALVEA STAYSQPSVT GTEKLSEA
Length

398

Mol. Wt

44.709 kDa

pI

9.3 (calculated)

Extinction coefficient

88,350 - 89,850 (calc based on 15 Y, 12 W, and 12 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

33..202

PF00535 Glycosyl transferase family 2

PMID:19920124[6]

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Structure
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Structures

<beststructure> gene=yaiP taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128348

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945308

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001243

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:Q47536

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G6215

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13298

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945308

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002829

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3083

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed
  6. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

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