tynA:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G43670 (score: 1.000; bootstrap: 82%)
  • AT1G62810 (score: 0.738)
  • AT4G12290 (score: 0.382)
  • AT1G31710 (score: 0.222)
  • AT1G31670 (score: 0.187)
  • AT4G14940 (score: 0.173)
  • AT1G31690 (score: 0.105)
  • AT4G12280 (score: 0.088)
  • AT4G12270 (score: 0.065)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000007133 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000012286 (score: 0.293)
  • ENSBTAP00000001383 (score: 0.293)
  • ENSBTAP00000014327 (score: 0.291)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006947 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000021620 (score: 0.276)
  • ENSCAFP00000021681 (score: 0.255)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050320-133 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050320-134 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000004625 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000354193 (score: 1.000; bootstrap: 100%)
  • ENSP00000253799 (score: 0.279)
  • ENSP00000312326 (score: 0.268)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000026896 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000002487 (score: 0.262)
  • ENSMMUP00000010592 (score: 0.256)
  • ENSMMUP00000002488 (score: 0.196)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004538 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018852 (score: 0.261)

From Inparanoid:20070104

Mus musculus

  • MGI:1923757 (score: 1.000; bootstrap: 100%)
  • MGI:3618290 (score: 0.506)
  • MGI:1917011 (score: 0.472)
  • MGI:2682321 (score: 0.292)
  • MGI:1306797 (score: 0.277)
  • MGI:2668431 (score: 0.260)

From Inparanoid:20070104

Oryza gramene

  • Q5Z6D3 (score: 1.000; bootstrap: 88%)
  • Q69KW1 (score: 0.273)
  • Q7XWW0 (score: 0.183)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000044191 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000015707 (score: 0.276)
  • ENSPTRP00000015708 (score: 0.263)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011512 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000048618 (score: 0.525)
  • ENSRNOP00000033821 (score: 0.481)
  • ENSRNOP00000011588 (score: 0.304)
  • ENSRNOP00000028009 (score: 0.281)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC2E1P34 (score: 1.000; bootstrap: 100%)
  • SPBC12896c (score: 0.476)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000155616 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000163870 (score: 0.294)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016700001 (score: 1.000; bootstrap: 100%)
  • GSTENP00008440001 (score: 0.298)
  • GSTENP00016699001 (score: 0.144)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000026212 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000027550 (score: 0.293)

From Inparanoid:20070104


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02728 Copper amine oxidase, N3 domain

Pfam (EcoliWiki Page)

PF02727 Copper amine oxidase, N2 domain

Pfam (EcoliWiki Page)

PF01179 Copper amine oxidase, enzyme domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:49998

Panther (EcoliWiki Page)

PTHR10638:SF12

Superfamily (EcoliWiki Page)

SUPERFAMILY:54416

Superfamily (EcoliWiki Page)

SUPERFAMILY:54416

Superfamily (EcoliWiki Page)

SUPERFAMILY:55383

Pfam (EcoliWiki Page)

PF07833 Copper amine oxidase N-terminal domain

EcoCyc

EcoCyc:EG13139

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13139

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002427

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2934

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004639

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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