thiQ:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

ThiQ

Synonyms

thiamin transporter subunit[1], ATP-binding component of ABC superfamily[1], B0066[2][1], YabJ[2][1], SfuC[2][1], ThiQ[2][1] , ECK0067, JW0065, sfuC, yabJ, b0066

Product description

SfuC[2][3];

Component of thiamin ABC transporter[2][3]

Thiamine and thiamine pyrophosphate ABC transporter[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of thiamin ABC transporter

could be indirect

Protein

napC

PMID:16606699[5]

Experiment(s):EBI-1135483

Protein

groL

PMID:16606699[5]

Experiment(s):EBI-1135483

Protein

ispG

PMID:16606699[5]

Experiment(s):EBI-1135483

Protein

carA

PMID:16606699[5]

Experiment(s):EBI-1135483
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

cytoplasm

From EcoCyc[3]


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MLKLTDITWL YHHLPMRFSL TVERGEQVAI LGPSGAGKST LLNLIAGFLT PASGSLTIDG
VDHTTMPPSR RPVSMLFQEN NLFSHLTVAQ NIGLGLNPGL KLNAVQQGKM HAIARQMGID
NLMARLPGEL SGGQRQRVAL ARCLVREQPI LLLDEPFSAL DPALRQEMLT LVSTSCQQQK
MTLLMVSHSV EDAARIATRS VVVADGRIAW QGMTNELLSG KASASALLGI TG
Length

232

Mol. Wt

24.999 kDa

pI

9.2 (calculated)

Extinction coefficient

12,490 - 12,740 (calc based on 1 Y, 2 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

39..158

PF00005 ABC transporter

PMID:19920124[6]

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Structure
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Structures

<beststructure> gene=thiQ taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128060

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:944785

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000244

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P31548

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11572

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11572

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:944785

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001524

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1532

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  6. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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