sthA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

SthA

Synonyms

pyridine nucleotide transhydrogenase, soluble[1], B3962[2][1], Sth[2][1], SthA[2][1], UdhA[2][1] , ECK3954, JW5551, sth, udhA, b3962

Product description

SthA[2][3];

Component of pyridine nucleotide transhydrogenase, soluble[2][3]

Soluble pyridine nucleotide transhydrogenase[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of pyridine nucleotide transhydrogenase, soluble

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

cytoplasm

From EcoCyc[3]


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MGLVKQGARV AVIERYQNVG GGCTHWGTIP SKALRHAVSR IIEFNQNPLY SDHSRLLRSS
FADILNHADN VINQQTRMRQ GFYERNHCEI LQGNARFVDE HTLALDCPDG SVETLTAEKF
VIACGSRPYH PTDVDFTHPR IYDSDSILSM HHEPRHVLIY GAGVIGCEYA SIFRGMDVKV
DLINTRDRLL AFLDQEMSDS LSYHFWNSGV VIRHNEEYEK IEGCDDGVIM HLKSGKKLKA
DCLLYANGRT GNTDSLALQN IGLETDSRGQ LKVNSMYQTA QPHVYAVGDV IGYPSLASAA
YDQGRIAAQA LVKGEATAHL IEDIPTGIYT IPEISSVGKT EQQLTAMKVP YEVGRAQFKH
LARAQIVGMN VGTLKILFHR ETKEILGIHC FGERAAEIIH IGQAIMEQKG GGNTIEYFVN
TTFNYPTMAE AYRVAALNGL NRLF
Length

444

Mol. Wt

49.414 kDa

pI

6.8 (calculated)

Extinction coefficient

39,310 - 40,310 (calc based on 19 Y, 2 W, and 8 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Initiator Methionine

1

Removed

UniProt:P27306

Domain

178..259

PF00070 Pyridine nucleotide-disulphide oxidoreductase

PMID:19920124[5]

Domain

346..458

PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

PMID:19920124[5]

Domain

8..317

PF07992 Pyridine nucleotide-disulphide oxidoreductase

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=sthA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111670

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948461

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012975

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P27306

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11428

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11428

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948461

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001392

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1398

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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