sseB:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

SseB

Synonyms

rhodanase-like enzyme, sulfur transfer from thiosulfate[1], B2522[2][1], SseB[2][1] , ECK2519, JW5404, b2522

Product description

overproduction causes enhanced serine sensitivity[2][3]

Enhances serine sensitivity (inhibits homoserine deHase) on lactate; weaker than sseA[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MVLMSETKNE LEDLLEKAAT EPAHRPAFFR TLLESTVWVP GTAAQGEAVV EDSALDLQHW
EKEDGTSVIP FFTSLEALQQ AVEDEQAFVV MPVRTLFEMT LGETLFLNAK LPTGKEFMPR
EISLLIGEEG NPLSSQEILE GGESLILSEV AEPPAQMIDS LTTLFKTIKP VKRAFICSIK
ENEEAQPNLL IGIEADGDIE EIIQATGSVA TDTLPGDEPI DICQVKKGEK GISHFITEHI
APFYERRWGG FLRDFKQNRI I
Length

261

Mol. Wt

28.986 kDa

pI

4.3 (calculated)

Extinction coefficient

17,990 - 18,240 (calc based on 1 Y, 3 W, and 2 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

1..258

PF07179 SseB protein

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=sseB taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111452

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946994

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008301

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0AFZ1

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11601

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11601

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946994

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001549

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1558

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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