selC:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

tRNA-Sec(UCA) (Selenocysteyl tRNA-UCA converted from serine tRNA)

Synonyms

tRNA-Sec(UCA) (Selenocysteyl tRNA-UCA, converted from serine tRNA)[1]

Product description


EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties

Type

tRNA

Sequence
GGAAGAUCGU CGUCUCCGGU GAGGCGGCUG GACUUCAAAU CCAGUUGGGG CCGCCAGCGG
UCCCGGGCAG GUUCGACUCC UGUGAUCUUC CGCCA
Mol. Wt

30788.28


Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

<motif_map />

Image couresy of Rfam


Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=selC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG30092

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG30092

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002534

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB4255

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011956

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

Categories

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