rhsC:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
RhsC |
|---|---|
| Synonyms |
rhsC element core protein RshC[1], B0700[2][1], RhsC[2][1] , ECK0689, JW0689, b0700 |
| Product description |
RhsC protein in rhs element[2][3] Function unknown, encoded within RhsC repeat; hotspot for chromosomal duplication formation[4] |
| EC number (for enzymes) |
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| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
dnaK |
Experiment(s):EBI-1137716 | ||
|
Protein |
rhsA |
Experiment(s):EBI-1137716 | ||
|
Protein |
groL |
Experiment(s):EBI-1137716 | ||
|
Protein |
ybfO |
Experiment(s):EBI-1137716, EBI-1137722 | ||
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG ETDIALPGPL PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS LYFEHLFPGE DGYSRSESLW LVRGGVAKLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ GPWWLLGWCE RVPEADEVLP APLPPYRVLT GLVDRFGRTQ TFHREAAGEF SGEITGVTDG AGRHFRLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY TEYGRDNGIR LSAVWLTHDP EYPENLPAAP LVRYGWTPRG ELAAVYDRSN TQVRSFTYDD KYRGRMVAHR HTGRPEICYR YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLNRREVLH TQGEGGLKRV VKKEHADGSV TQSQFDAVGR LRAQTDAAGR TTEYSPDVVT GLITRITTPD GRASAFYYNH HSQLTSATGP DGLEIRREYD EWGRLIQETA PDGDITRYRY DNPHSDLPCA TEDATGSRKT MTWSRYGQLL SFTDCSGYVT RYDHDRFGQV TAVHREEGLS QYRAYDSRGQ LIAVKDTQGH ETRYEYNAAG DLTTVIAPDG SRNGTQYDAW GKAICTTQGG LTRSMEYDAA GRVIRLTSEN GSHTTFRYDV LDRLIQETGF DGRTQRYHHD LTGKLIRSED EGLVTHWHYD EADRLTHRTV NGETAERWQY DERGWLTDIS HISEGHRVTV HYGYDSKGRL ASEHLTVHHP QTNELLWQHE TRHAYNAQGL ANRCIPDSLP AVEWLTYGSG WLSGMKLGDT PLVEYTRDRL HRETLRSFGR YELTTAYTPA GQLQSQHLNS LLSDRDYTWN DNGELIRISS PRQTRSYSYS TTGRLTGVHT TAANLDIRIP YTTDPAGNRL PDPELHPDSA LSMWPDNRIA RDAHYLYRYD RHGRLTEKTD LIPEGVIRTD DERTHRYHYD SQHRLVHYTR TQYAEPLVES RYLYDPLGRR VAKRVWRRER DLTGWMSLSR KPQVTWYGWD GDRLTTIQND RTRIQTIYQP GSFTPLIRVE TATGELAKTQ RRSLADTLQQ SGGEDGGSVV FPPVLVQMLD RLESEILADR VSEESRRWLA SCGLTVAQMQ SQMDPVYTPA RKIHLYHCDH RGLPLALIST EGTTAWYAEY DEWGNLLNEE NPHQLQQLIR LPGQQYDEES GLYYNRHRYY DPLQGRYITQ DPIGLKGGWN FYQYPLNPIS NIDPLGLETL KCIKPLHSMG GTGERSGPDI WGNPFYHQYL CVPDGKGDYT CGGQDQRGES KGDGLWGPGK ASNDTKEAAG RCDLVETDNS CVENCLKGKF KEVRPRYSVL PDIFTPINLG LFKNCQDWSN DSLETCKMKC SGNNIGRFIR FVFTGVM |
| Length |
1,397 |
| Mol. Wt |
157.778 kDa |
| pI |
6.7 (calculated) |
| Extinction coefficient |
278,240 - 280,615 (calc based on 76 Y, 30 W, and 19 C residues) |
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Domains/Motifs/Modification Sites
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
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| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 5.3 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
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