puuC:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

PuuC

Synonyms

gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent[1], B1300[2][1], AldH[2][1], PuuC[2][1] , aldH, ECK1295, JW1293, b1300

Product description

γ-glutamyl-γ-aminobutyraldehyde dehydrogenase[2][3]

gamma-Glutamyl-gamma-aminobutyraldehyde dehydrogenase; putrescine utilization pathway[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015590

P

Seeded from EcoCyc (v14.0)

complete

GO:0006113

fermentation

P

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016160

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016161

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016162

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

P

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MNFHHLAYWQ DKALSLAIEN RLFINGEYTA AAENETFETV DPVTQAPLAK IARGKSVDID
RAMSAARGVF ERGDWSLSSP AKRKAVLNKL ADLMEAHAEE LALLETLDTG KPIRHSLRDD
IPGAARAIRW YAEAIDKVYG EVATTSSHEL AMIVREPVGV IAAIVPWNFP LLLTCWKLGP
ALAAGNSVIL KPSEKSPLSA IRLAGLAKEA GLPDGVLNVV TGFGHEAGQA LSRHNDIDAI
AFTGSTRTGK QLLKDAGDSN MKRVWLEAGG KSANIVFADC PDLQQAASAT AAGIFYNQGQ
VCIAGTRLLL EESIADEFLA LLKQQAQNWQ PGHPLDPATT MGTLIDCAHA DSVHSFIREG
ESKGQLLLDG RNAGLAAAIG PTIFVDVDPN ASLSREEIFG PVLVVTRFTS EEQALQLAND
SQYGLGAAVW TRDLSRAHRM SRRLKAGSVF VNNYNDGDMT VPFGGYKQSG NGRDKSLHAL
EKFTELKTIW ISLEA
Length

495

Mol. Wt

53.419 kDa

pI

6.0 (calculated)

Extinction coefficient

61,420 - 61,920 (calc based on 8 Y, 9 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

28..489

PF00171 Aldehyde dehydrogenase family

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=puuC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16129261

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947003

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004376

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P23883

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10036

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10036

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947003

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000033

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0035

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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