putP:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000011580 (score: 1.000; bootstrap: 69%)
  • ENSANGP00000011955 (score: 0.570)
  • ENSANGP00000023805 (score: 0.356)
  • ENSANGP00000010569 (score: 0.321)
  • ENSANGP00000002287 (score: 0.304)
  • ENSANGP00000019520 (score: 0.282)
  • ENSANGP00000012870 (score: 0.266)
  • ENSANGP00000019502 (score: 0.257)
  • ENSANGP00000022454 (score: 0.166)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000010240 (score: 1.000; bootstrap: 61%)
  • ENSAPMP00000007743 (score: 0.441)
  • ENSAPMP00000003219 (score: 0.295)
  • ENSAPMP00000007399 (score: 0.274)
  • ENSAPMP00000016151 (score: 0.167)
  • ENSAPMP00000032180 (score: 0.100)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00028503 (score: 1.000; bootstrap: 56%)
  • WBGene00025216 (score: 0.060)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00014092 (score: 1.000; bootstrap: 57%)
  • WBGene00018716 (score: 0.056)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003522 (score: 1.000; bootstrap: 78%)
  • ENSCINP00000014733 (score: 0.761)
  • ENSCINP00000011213 (score: 0.519)
  • ENSCINP00000013795 (score: 0.434)
  • ENSCINP00000019830 (score: 0.432)
  • ENSCINP00000005833 (score: 0.379)
  • ENSCINP00000015025 (score: 0.278)
  • ENSCINP00000000097 (score: 0.269)
  • ENSCINP00000010815 (score: 0.253)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037895 (score: 1.000; bootstrap: 75%)
  • FBgn0035293 (score: 1.000; bootstrap: 73%)
  • FBgn0029950 (score: 0.471)
  • FBgn0051090 (score: 0.384)
  • FBgn0031998 (score: 0.315)
  • FBgn0017448 (score: 0.277)
  • FBgn0039872 (score: 0.253)
  • FBgn0039873 (score: 0.247)
  • FBgn0039394 (score: 0.245)
  • FBgn0053124 (score: 0.244)
  • FBgn0052669 (score: 0.219)
  • FBgn0034494 (score: 0.207)
  • FBgn0051668 (score: 0.190)
  • FBgn0051262 (score: 0.176)
  • FBgn0039391 (score: 0.167)
  • FBgn0039393 (score: 0.135)
  • FBgn0038652 (score: 0.116)
  • FBgn0039390 (score: 0.073)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21946-PA (score: 1.000; bootstrap: 65%)
  • GA21442-PA (score: 0.273)
  • GA15290-PA (score: 0.223)
  • GA17054-PA (score: 0.213)
  • GA21420-PA (score: 0.172)
  • GA20543-PA (score: 0.161)

From Inparanoid:20070104

Oryza gramene

  • Q9FRN4 (score: 1.000; bootstrap: 100%)
  • Q7XBS0 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC8693c (score: 1.000; bootstrap: 100%)
  • SPBPB8B62c (score: 0.454)
  • SPBC23G73c (score: 0.352)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000132536 (score: 1.000; bootstrap: 47%)
  • NEWSINFRUP00000139147 (score: 0.363)
  • NEWSINFRUP00000165007 (score: 0.340)
  • NEWSINFRUP00000165433 (score: 0.337)
  • NEWSINFRUP00000143770 (score: 0.303)
  • NEWSINFRUP00000181937 (score: 0.297)
  • NEWSINFRUP00000182500 (score: 0.262)

From Inparanoid:20070104

E. coli O157

PUTP

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03239 Iron permease FTR1 family

Panther (EcoliWiki Page)

PTHR11819:SF51

Pfam (EcoliWiki Page)

PF00474 Sodium:solute symporter family

EcoCyc

EcoCyc:EG10802

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10802

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000793

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0795

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003433

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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