pspA:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G65260 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000023111 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000932 (score: 0.305)
  • ENSBTAP00000013737 (score: 0.075)
  • ENSBTAP00000030962 (score: 0.073)
  • ENSBTAP00000008510 (score: 0.071)
  • ENSBTAP00000009781 (score: 0.061)
  • ENSBTAP00000004905 (score: 0.058)
  • ENSBTAP00000004733 (score: 0.051)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016611 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10507-PA (score: 1.000; bootstrap: 100%)
  • GA12841-PA (score: 0.358)

From Inparanoid:20070104

Oryza gramene

  • Q8S0J7 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000152497 (score: 1.000; bootstrap: 51%)
  • NEWSINFRUP00000127930 (score: 1.000; bootstrap: 53%)
  • NEWSINFRUP00000161948 (score: 0.113)
  • NEWSINFRUP00000136665 (score: 0.096)

From Inparanoid:20070104

Shigella flexneri

PSPA

From SHIGELLACYC

E. coli O157

PSPA

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF04012 PspA/IM30 family

EcoCyc

EcoCyc:EG10776

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10776

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000767

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0769

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004387

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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