proC:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000011470 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000018847 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G14800 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000046 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000047 (score: 0.830)
  • ENSBTAP00000022364 (score: 0.122)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00036235 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010924 (score: 1.000; bootstrap: 87%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000023787 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000008848 (score: 0.807)
  • ENSCAFP00000001902 (score: 0.095)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006770 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000011143 (score: 0.079)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050522-26 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050522-26 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2615 (score: 0.828)
  • ZDB-GENE-040426-1675 (score: 0.828)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0232207 (score: 1.000; bootstrap: 100%)
  • DDB0232206 (score: 0.464)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038516 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19170-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025936 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000220966 (score: 1.000; bootstrap: 100%)
  • ENSP00000352100 (score: 0.081)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000019243 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000016933 (score: 0.111)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007361 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000003807 (score: 0.859)
  • ENSMODP00000014018 (score: 0.127)

From Inparanoid:20070104

Mus musculus

  • MGI:2384795 (score: 1.000; bootstrap: 97%)
  • MGI:1277956 (score: 0.798)

From Inparanoid:20070104

Oryza gramene

  • Q5EI64 (score: 1.000; bootstrap: 100%)
  • Q84UC6 (score: 0.831)
  • Q4TZJ2 (score: 0.791)
  • Q8GT01 (score: 0.780)
  • Q5JMU4 (score: 0.316)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000035326 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000004379 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000011899 (score: 0.105)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YER023W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPYUG75 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000131351 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00015680001 (score: 1.000; bootstrap: 100%)
  • GSTENP00018566001 (score: 0.071)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000011845 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Shigella flexneri

PROC

From SHIGELLACYC

E. coli O157

PROC

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03807 NADP oxidoreductase coenzyme F420-dependent

Superfamily (EcoliWiki Page)

SUPERFAMILY:48179

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR11645:SF0

EcoCyc

EcoCyc:EG10769

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10769

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000760

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0762

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001338

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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